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IRAK4_BOVIN
ID   IRAK4_BOVIN             Reviewed;         461 AA.
AC   Q1RMT8;
DT   28-NOV-2006, integrated into UniProtKB/Swiss-Prot.
DT   16-MAY-2006, sequence version 1.
DT   03-AUG-2022, entry version 117.
DE   RecName: Full=Interleukin-1 receptor-associated kinase 4;
DE            Short=IRAK-4;
DE            EC=2.7.11.1;
GN   Name=IRAK4;
OS   Bos taurus (Bovine).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC   Bovinae; Bos.
OX   NCBI_TaxID=9913;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=Hereford; TISSUE=Uterus;
RG   NIH - Mammalian Gene Collection (MGC) project;
RL   Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Serine/threonine-protein kinase that plays a critical role in
CC       initiating innate immune response against foreign pathogens. Involved
CC       in Toll-like receptor (TLR) and IL-1R signaling pathways. Is rapidly
CC       recruited by MYD88 to the receptor-signaling complex upon TLR
CC       activation to form the Myddosome together with IRAK2. Phosphorylates
CC       initially IRAK1, thus stimulating the kinase activity and intensive
CC       autophosphorylation of IRAK1. Phosphorylates E3 ubiquitin ligases
CC       Pellino proteins (PELI1, PELI2 and PELI3) to promote pellino-mediated
CC       polyubiquitination of IRAK1. Then, the ubiquitin-binding domain of
CC       IKBKG/NEMO binds to polyubiquitinated IRAK1 bringing together the
CC       IRAK1-MAP3K7/TAK1-TRAF6 complex and the NEMO-IKKA-IKKB complex. In
CC       turn, MAP3K7/TAK1 activates IKKs (CHUK/IKKA and IKBKB/IKKB) leading to
CC       NF-kappa-B nuclear translocation and activation. Alternatively,
CC       phosphorylates TIRAP to promote its ubiquitination and subsequent
CC       degradation. Phosphorylates NCF1 and regulates NADPH oxidase activation
CC       after LPS stimulation suggesting a similar mechanism during microbial
CC       infections (By similarity). {ECO:0000250}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-
CC         [protein]; Xref=Rhea:RHEA:17989, Rhea:RHEA-COMP:9863, Rhea:RHEA-
CC         COMP:11604, ChEBI:CHEBI:15378, ChEBI:CHEBI:29999, ChEBI:CHEBI:30616,
CC         ChEBI:CHEBI:83421, ChEBI:CHEBI:456216; EC=2.7.11.1;
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-
CC         threonyl-[protein]; Xref=Rhea:RHEA:46608, Rhea:RHEA-COMP:11060,
CC         Rhea:RHEA-COMP:11605, ChEBI:CHEBI:15378, ChEBI:CHEBI:30013,
CC         ChEBI:CHEBI:30616, ChEBI:CHEBI:61977, ChEBI:CHEBI:456216;
CC         EC=2.7.11.1;
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC   -!- SUBUNIT: Associates with MYD88 and IRAK2 to form a ternary complex
CC       called the Myddosome. Once phosphorylated, IRAK4 dissociates from the
CC       receptor complex and then associates with the TNF receptor-associated
CC       factor 6 (TRAF6), IRAK1, and PELI1; this intermediate complex is
CC       required for subsequent NF-kappa-B activation. Direct binding of SMAD6
CC       to PELI1 prevents complex formation and hence negatively regulates
CC       IL1R-TLR signaling and eventually NF-kappa-B-mediated gene expression.
CC       Interacts with IL1RL1. Interacts (when phosphorylated) with IRAK1. May
CC       interact (when phosphorylated) with IRAK3.
CC       {ECO:0000250|UniProtKB:Q9NWZ3}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC   -!- PTM: Phosphorylated. {ECO:0000250}.
CC   -!- SIMILARITY: Belongs to the protein kinase superfamily. TKL Ser/Thr
CC       protein kinase family. Pelle subfamily. {ECO:0000305}.
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DR   EMBL; BC114720; AAI14721.1; -; mRNA.
DR   RefSeq; NP_001069466.1; NM_001075998.1.
DR   RefSeq; XP_005206483.1; XM_005206426.3.
DR   AlphaFoldDB; Q1RMT8; -.
DR   SMR; Q1RMT8; -.
DR   STRING; 9913.ENSBTAP00000028115; -.
DR   PaxDb; Q1RMT8; -.
DR   Ensembl; ENSBTAT00000028115; ENSBTAP00000028115; ENSBTAG00000021105.
DR   GeneID; 533692; -.
DR   KEGG; bta:533692; -.
DR   CTD; 51135; -.
DR   VEuPathDB; HostDB:ENSBTAG00000021105; -.
DR   VGNC; VGNC:30268; IRAK4.
DR   eggNOG; KOG1187; Eukaryota.
DR   GeneTree; ENSGT00940000158792; -.
DR   HOGENOM; CLU_000288_21_15_1; -.
DR   InParanoid; Q1RMT8; -.
DR   OMA; WHQRCLI; -.
DR   OrthoDB; 684563at2759; -.
DR   TreeFam; TF351380; -.
DR   Reactome; R-BTA-9020702; Interleukin-1 signaling.
DR   Proteomes; UP000009136; Chromosome 5.
DR   Bgee; ENSBTAG00000021105; Expressed in monocyte and 107 other tissues.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0005149; F:interleukin-1 receptor binding; IEA:Ensembl.
DR   GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR   GO; GO:0019901; F:protein kinase binding; IEA:Ensembl.
DR   GO; GO:0106310; F:protein serine kinase activity; IEA:RHEA.
DR   GO; GO:0004674; F:protein serine/threonine kinase activity; IBA:GO_Central.
DR   GO; GO:0019221; P:cytokine-mediated signaling pathway; IBA:GO_Central.
DR   GO; GO:0045087; P:innate immune response; IEA:UniProtKB-KW.
DR   GO; GO:0035556; P:intracellular signal transduction; IBA:GO_Central.
DR   GO; GO:0002446; P:neutrophil mediated immunity; ISS:UniProtKB.
DR   GO; GO:1990266; P:neutrophil migration; ISS:UniProtKB.
DR   GO; GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB signaling; IBA:GO_Central.
DR   GO; GO:0006468; P:protein phosphorylation; IEA:InterPro.
DR   CDD; cd08793; Death_IRAK4; 1.
DR   Gene3D; 1.10.533.10; -; 1.
DR   InterPro; IPR011029; DEATH-like_dom_sf.
DR   InterPro; IPR017428; IRAK4.
DR   InterPro; IPR037970; IRAK4_Death.
DR   InterPro; IPR011009; Kinase-like_dom_sf.
DR   InterPro; IPR000719; Prot_kinase_dom.
DR   Pfam; PF00069; Pkinase; 1.
DR   PIRSF; PIRSF038189; IRAK4; 1.
DR   SMART; SM00220; S_TKc; 1.
DR   SUPFAM; SSF47986; SSF47986; 1.
DR   SUPFAM; SSF56112; SSF56112; 1.
DR   PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
PE   2: Evidence at transcript level;
KW   Acetylation; ATP-binding; Cytoplasm; Immunity; Innate immunity; Kinase;
KW   Magnesium; Nucleotide-binding; Phosphoprotein; Reference proteome;
KW   Serine/threonine-protein kinase; Transferase.
FT   CHAIN           1..461
FT                   /note="Interleukin-1 receptor-associated kinase 4"
FT                   /id="PRO_0000260158"
FT   DOMAIN          20..104
FT                   /note="Death"
FT   DOMAIN          187..455
FT                   /note="Protein kinase"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   ACT_SITE        312
FT                   /note="Proton acceptor"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   BINDING         193..201
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   BINDING         214
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   BINDING         314..317
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   BINDING         330
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   MOD_RES         1
FT                   /note="N-acetylmethionine"
FT                   /evidence="ECO:0000250|UniProtKB:Q9NWZ3"
FT   MOD_RES         34
FT                   /note="N6-acetyllysine"
FT                   /evidence="ECO:0000250|UniProtKB:Q9NWZ3"
FT   MOD_RES         343
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0000250|UniProtKB:Q9NWZ3"
FT   MOD_RES         346
FT                   /note="Phosphothreonine"
FT                   /evidence="ECO:0000250|UniProtKB:Q9NWZ3"
FT   MOD_RES         347
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0000250|UniProtKB:Q9NWZ3"
SQ   SEQUENCE   461 AA;  51575 MW;  EF9DE6D50AD2D9CC CRC64;
     MNKPITASTY VRCLSLGLIR KLSDFIDPQE GWKKLAVAIK KPSGDDRYNQ FHIRRFEALL
     QIGKSPTCEL LFDWGTTNCT VGDLVDILVQ NEFFAPASLL LPDAVPKNVN TLPSKVTVVA
     VQQKPKPLCG KDRTSVISDE NPEQNYVLPD SSSPENTSLE FSDTRFHSFS FFELKDVTNN
     FDERPISVGG NKMGEGGFGV VYKGYVNNRT VAVKKLAAMV DISTEELKQQ FDQEIKVMAK
     CQHENLVELL GFSSDGDDLC LVYVYMPNGS LLDRLSCLDG TPPLSWNMRC KIAQGAANGL
     SYLHENHHIH RDIKSANILL DEDFTAKISD FGLARASEKF AQTVMTSRIV GTTAYMAPEA
     LRGEITPKSD IYSFGVVLLE IITGLPAVDE HREPQLLLDI KEEIEDEEKT IEDYVDRKMN
     DIDSTSIETM YSVASQCLHE KKNKRPDIKK VQQLLEEMTG S
 
 
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