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APRA_PSEPA
ID   APRA_PSEPA              Reviewed;         477 AA.
AC   A0A0C5CJR8;
DT   16-SEP-2015, integrated into UniProtKB/Swiss-Prot.
DT   29-APR-2015, sequence version 1.
DT   03-AUG-2022, entry version 18.
DE   RecName: Full=Metallopeptidase AprA {ECO:0000305|Ref.1};
DE            EC=3.4.24.- {ECO:0000269|Ref.1};
DE   AltName: Full=Heat-resistant peptidase {ECO:0000303|Ref.1};
DE   Flags: Precursor;
GN   Name=aprA {ECO:0000303|Ref.1};
OS   Pseudomonas panacis.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=307251;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC DNA], FUNCTION, CATALYTIC ACTIVITY,
RP   BIOPHYSICOCHEMICAL PROPERTIES, ACTIVITY REGULATION, SUBCELLULAR LOCATION,
RP   AND IDENTIFICATION BY MASS SPECTROMETRY.
RC   STRAIN=WS4668;
RX   DOI=10.1016/j.idairyj.2015.04.009;
RA   Baur C., Krewinkel M., Kutzli I., Kranz B., von Neubeck M., Huptas C.,
RA   Wenning M., Scherer S., Stoeckel M., Hinrichs J., Stressler T., Fischer L.;
RT   "Isolation and characterization of a heat-resistant peptidase from
RT   Pseudomonas panacis withstanding general UHT processes.";
RL   Int. Dairy J. 49:46-55(2015).
CC   -!- FUNCTION: Peptidase able to cleave azocasein and the milk substrates
CC       beta-casein and Na-caseinate. Can withstand UHT processing of milk, and
CC       is able to spoil UHT milk over the storage period. {ECO:0000269|Ref.1}.
CC   -!- COFACTOR:
CC       Name=Ca(2+); Xref=ChEBI:CHEBI:29108;
CC         Evidence={ECO:0000250|UniProtKB:Q03023};
CC       Note=Binds 8 Ca(2+) ions per subunit. {ECO:0000250|UniProtKB:Q03023};
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC         Evidence={ECO:0000250|UniProtKB:Q03023};
CC       Note=Binds 1 zinc ion per subunit. {ECO:0000250|UniProtKB:Q03023};
CC   -!- ACTIVITY REGULATION: Is completely inhibited by the metal cation
CC       chelators 1,10-phenanthroline and EDTA, but PMSF, pepstatin A and E-64
CC       have no effect on activity. {ECO:0000269|Ref.1}.
CC   -!- BIOPHYSICOCHEMICAL PROPERTIES:
CC       pH dependence:
CC         Optimum pH is 8. {ECO:0000269|Ref.1};
CC       Temperature dependence:
CC         Optimum temperature is 40 degrees Celsius. At higher temperatures,
CC         the activity decreases rapidly. Shows high enzyme activity with
CC         casein as a substrate under the storage conditions of UHT milk. Is
CC         highly thermostable. Withstands general ultra-high temperature (UHT)
CC         processing (138 degrees Celsius for 18 seconds) in skim milk, with
CC         88% of the initial enzyme activity remaining after heating. The milk
CC         matrix has a protective effect on the enzyme activity during the
CC         thermal process. {ECO:0000269|Ref.1};
CC   -!- SUBCELLULAR LOCATION: Secreted {ECO:0000269|Ref.1}.
CC   -!- SIMILARITY: Belongs to the peptidase M10B family. {ECO:0000305}.
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DR   EMBL; KP203865; AJO27033.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0C5CJR8; -.
DR   SMR; A0A0C5CJR8; -.
DR   MEROPS; M10.060; -.
DR   GO; GO:0031012; C:extracellular matrix; IEA:InterPro.
DR   GO; GO:0005615; C:extracellular space; IDA:UniProtKB.
DR   GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR   GO; GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.
DR   GO; GO:0008237; F:metallopeptidase activity; IDA:UniProtKB.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0030163; P:protein catabolic process; IDA:UniProtKB.
DR   GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR   CDD; cd04277; ZnMc_serralysin_like; 1.
DR   Gene3D; 2.150.10.10; -; 1.
DR   Gene3D; 3.40.390.10; -; 1.
DR   InterPro; IPR018511; Hemolysin-typ_Ca-bd_CS.
DR   InterPro; IPR001343; Hemolysn_Ca-bd.
DR   InterPro; IPR024079; MetalloPept_cat_dom_sf.
DR   InterPro; IPR001818; Pept_M10_metallopeptidase.
DR   InterPro; IPR016294; Pept_M10B.
DR   InterPro; IPR013858; Peptidase_M10B_C.
DR   InterPro; IPR006026; Peptidase_Metallo.
DR   InterPro; IPR034033; Serralysin-like.
DR   InterPro; IPR011049; Serralysin-like_metalloprot_C.
DR   Pfam; PF00353; HemolysinCabind; 1.
DR   Pfam; PF00413; Peptidase_M10; 1.
DR   Pfam; PF08548; Peptidase_M10_C; 1.
DR   PIRSF; PIRSF001205; Peptidase_M10B; 1.
DR   SMART; SM00235; ZnMc; 1.
DR   SUPFAM; SSF51120; SSF51120; 1.
DR   PROSITE; PS00330; HEMOLYSIN_CALCIUM; 1.
DR   PROSITE; PS00142; ZINC_PROTEASE; 1.
PE   1: Evidence at protein level;
KW   Calcium; Hydrolase; Metal-binding; Metalloprotease; Protease; Repeat;
KW   Secreted; Signal; Zinc.
FT   SIGNAL          1..20
FT                   /evidence="ECO:0000255"
FT   CHAIN           21..477
FT                   /note="Metallopeptidase AprA"
FT                   /id="PRO_0000433639"
FT   REPEAT          343..360
FT                   /note="Hemolysin-type calcium-binding 1"
FT                   /evidence="ECO:0000305"
FT   REPEAT          361..378
FT                   /note="Hemolysin-type calcium-binding 2"
FT                   /evidence="ECO:0000305"
FT   REPEAT          379..391
FT                   /note="Hemolysin-type calcium-binding 3"
FT                   /evidence="ECO:0000305"
FT   ACT_SITE        184
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU10095"
FT   BINDING         183
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         187
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         193
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         264
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         266
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         268
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         296
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         298
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         299
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         301
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         301
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         338
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         340
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="2"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         345
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="3"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         347
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="3"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         349
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="3"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         354
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="4"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         356
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="4"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         358
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="4"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         362
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="3"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         363
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="5"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         364
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="3"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         365
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="5"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         367
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="3"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         367
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="5"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         371
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="4"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         372
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="6"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         373
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="4"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         374
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="6"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         376
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="4"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         376
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="6"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         380
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="5"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         381
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="7"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         382
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="5"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         383
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="7"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         385
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="5"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         385
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="7"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         394
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="6"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         401
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="6"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         411
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="7"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         453
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="8"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         455
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="8"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
FT   BINDING         461
FT                   /ligand="Ca(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29108"
FT                   /ligand_label="8"
FT                   /evidence="ECO:0000250|UniProtKB:Q03023"
SQ   SEQUENCE   477 AA;  49380 MW;  3C5A9627D0D01920 CRC64;
     MSKAKDKAIV SAAQASTAYS QIDSFSHLYD RGGNLTINGK PSYTVDQAAT QLLRDGAAYR
     DFDGNGKIDL TYTFLTSASS STMNKHGISG FSQFNAQQKA QAALAMQSWS DVANVTFTEK
     ASGGDGHMTF GNYSSGQDGA AAFAYLPGTG AGYDGTSWYL TNNSYTPNKT PDLNNYGRQT
     LTHEIGHTLG LAHPGDYNAG EGAPTYNDAT YGQDTRGYSL MSYWSESNTN QNFSKGGVEA
     YASGPLIDDI AAIQKLYGAN YNTRAGDTTY GFNSNTGRDF LSATSNADKL VFSVWDGGGN
     DTLDFSGFTQ NQKINLNEAS FSDVGGLVGN VSIAKGVTIE NAFGGAGNDL IIGNNAANVI
     KGGAGNDLIY GAGGADQLWG GAGNDTFVFG ASSDSKPGAA DKIFDFTSGS DKIDLSGITK
     GAGLTFVNAF TGHAGDAVLT YAAGTNLGTL AVDFSGHGVA DFLVTTVGQA AVSDIVA
 
 
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