IREB2_XENLA
ID IREB2_XENLA Reviewed; 955 AA.
AC Q6NTP2;
DT 28-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=Iron-responsive element-binding protein 2;
DE Short=IRE-BP 2;
GN Name=ireb2;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Ovary;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: RNA-binding protein that binds to iron-responsive elements
CC (IRES), which are stem-loop structures found in the 5'-UTR of ferritin,
CC and delta aminolevulinic acid synthase mRNAs, and in the 3'-UTR of
CC transferrin receptor mRNA. Binding to the IRE element in ferritin
CC results in the repression of its mRNA translation. Binding of the
CC protein to the transferrin receptor mRNA inhibits the degradation of
CC this otherwise rapidly degraded mRNA.
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; Evidence={ECO:0000250};
CC Note=Binds 1 [4Fe-4S] cluster per subunit. [4Fe-4S]-binding affects
CC RNA-binding activity, thereby inhibiting activity of the protein.
CC {ECO:0000250};
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- PTM: Ubiquitinated and degraded by the proteasome in presence of high
CC level of iron and oxygen. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the aconitase/IPM isomerase family.
CC {ECO:0000305}.
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DR EMBL; BC068915; AAH68915.1; -; mRNA.
DR RefSeq; NP_001084628.1; NM_001091159.1.
DR AlphaFoldDB; Q6NTP2; -.
DR SMR; Q6NTP2; -.
DR DNASU; 414584; -.
DR GeneID; 414584; -.
DR KEGG; xla:414584; -.
DR CTD; 414584; -.
DR Xenbase; XB-GENE-943202; ireb2.L.
DR Proteomes; UP000186698; Chromosome 3L.
DR Bgee; 414584; Expressed in muscle tissue and 19 other tissues.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0030350; F:iron-responsive element binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0030371; F:translation repressor activity; IEA:InterPro.
DR GO; GO:0006879; P:cellular iron ion homeostasis; IEA:InterPro.
DR GO; GO:0055072; P:iron ion homeostasis; ISS:UniProtKB.
DR CDD; cd01580; AcnA_IRP_Swivel; 1.
DR Gene3D; 3.20.19.10; -; 1.
DR Gene3D; 3.30.499.10; -; 3.
DR InterPro; IPR044137; AcnA_IRP_Swivel.
DR InterPro; IPR015931; Acnase/IPM_dHydase_lsu_aba_1/3.
DR InterPro; IPR001030; Acoase/IPM_deHydtase_lsu_aba.
DR InterPro; IPR015928; Aconitase/3IPM_dehydase_swvl.
DR InterPro; IPR006249; Aconitase/IRP2.
DR InterPro; IPR018136; Aconitase_4Fe-4S_BS.
DR InterPro; IPR036008; Aconitase_4Fe-4S_dom.
DR InterPro; IPR000573; AconitaseA/IPMdHydase_ssu_swvl.
DR InterPro; IPR029755; IRE-BP2.
DR PANTHER; PTHR11670; PTHR11670; 1.
DR PANTHER; PTHR11670:SF31; PTHR11670:SF31; 1.
DR Pfam; PF00330; Aconitase; 2.
DR Pfam; PF00694; Aconitase_C; 1.
DR PRINTS; PR00415; ACONITASE.
DR SUPFAM; SSF53732; SSF53732; 1.
DR TIGRFAMs; TIGR01341; aconitase_1; 1.
DR PROSITE; PS00450; ACONITASE_1; 1.
PE 2: Evidence at transcript level;
KW 4Fe-4S; Cytoplasm; Iron; Iron-sulfur; Metal-binding; Phosphoprotein;
KW Reference proteome; RNA-binding; Ubl conjugation.
FT CHAIN 1..955
FT /note="Iron-responsive element-binding protein 2"
FT /id="PRO_0000380117"
FT BINDING 504
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /evidence="ECO:0000250"
FT BINDING 570
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /evidence="ECO:0000250"
FT BINDING 573
FT /ligand="[4Fe-4S] cluster"
FT /ligand_id="ChEBI:CHEBI:49883"
FT /evidence="ECO:0000250"
SQ SEQUENCE 955 AA; 104437 MW; E7C09DDE005849F7 CRC64;
MTENPFHYLV ETLSGTSDKT FFNVSKLKAT EYDSLPYCIR VVLEAVVRNC DGVLVKEQDA
FNILNWKTKC EFKEIPFLPA RVMLQDFTGI PAMVDFAAMR DAISKFGKDP KQVNPACPTD
LIADHSLQLD FTKCIAAQNV SGLPAVETHR PTTTPGKTPG RKAQCRSQGG CKGACDLGAA
NGSSREQIEN TPMLCPFHLQ PIAEPETALK SLEIEFNRNK ERLQFFKWCS KAFQNVAVIP
PETGTVHQVN LEFLSRVVME EKGCIYPDSV LGTDSHTTMV NGLGILGLGV GGIESEAAML
GVPITLTLPE VVGCELTGTI NPIATSIDVV LSITKHLKQA GVAGTFVEFF GNGVSQLSVA
DRTTIANMCP EYGATVAFFP VDSVTLQHLK QTGVDLQCVK TFENYLKAVK LLRQENVQQP
LYSKVLQINL NSIVPYVSGP KRPQDRISVM DMKKDFETCL KEKTGLKGFQ IPEEKQNIMV
PVTYGNSEYS LSHGCVVIAA VTSCTNNCNP SVMLTAGLLA KKAVEAGLTV KPYIKTSLSP
GSGTVTYYLS ASGVLPYLSK LGFDIIGYGC ARCVGNTNPL PESIVTAIKE GELVACGVFS
GNKHFEGNRC SCVCANYLAS PPLVVAYALA GTVNIDLQTE PLGENAQGKK IFLQDIWPSR
EEVLEVEETL VIPSMFSELK LKIEKQNTRW NLLDAPESTL FPWDLRSTYI RSPPFFHKLE
KIPPPIQPIE RAYVLLYLGD SVTTDHMSPA GSIPRTSPAA KYLMQKNLVP REFNSYGARR
GNDAVMTRGT FANMKLFNKL VGKTGPKTIH LPSGQTMDVF DAAELYQRSE IPLIIIAGKK
YGLGNSRDWA AKGPFLLGVR VVIAESYEKI HKDHLVGMGI APLQFLSGEN AETLGLSGKE
QYSLSLPVDL TPGHKVEIKT NTGKIFHVIA AFDNEAEVTL YKHGGILSYV ARKYL