IRL1_GINBI
ID IRL1_GINBI Reviewed; 306 AA.
AC M1T9X3;
DT 20-DEC-2017, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2013, sequence version 1.
DT 03-AUG-2022, entry version 18.
DE RecName: Full=Phenylcoumaran benzylic ether reductase IRL1 {ECO:0000305};
DE EC=1.23.1.- {ECO:0000269|PubMed:23459862};
DE AltName: Full=Isoflavone reductase-like 1 {ECO:0000303|PubMed:23459862};
DE Short=GbIRL1 {ECO:0000303|PubMed:23459862};
DE Short=IFR-like protein 1 {ECO:0000303|PubMed:23459862};
GN Name=IRL1 {ECO:0000303|PubMed:23459862};
OS Ginkgo biloba (Ginkgo) (Maidenhair tree).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Ginkgoidae; Ginkgoales; Ginkgoaceae; Ginkgo.
OX NCBI_TaxID=3311;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, CATALYTIC ACTIVITY, TISSUE
RP SPECIFICITY, AND INDUCTION.
RX PubMed=23459862; DOI=10.1007/s00299-013-1397-2;
RA Hua C., Linling L., Feng X., Yan W., Honghui Y., Conghua W., Shaobing W.,
RA Zhiqin L., Juan H., Yuping W., Shuiyuan C., Fuliang C.;
RT "Expression patterns of an isoflavone reductase-like gene and its possible
RT roles in secondary metabolism in Ginkgo biloba.";
RL Plant Cell Rep. 32:637-650(2013).
CC -!- FUNCTION: Oxidoreductase involved in lignan biosynthesis. Catalyzes the
CC NADPH-dependent reduction of phenylcoumaran benzylic ethers. Converts
CC dehydrodiconiferyl alcohol (DDC) to isodihydrodehydrodiconiferyl
CC alcohol (IDDDC), and dihydrodehydrodiconiferyl alcohol (DDDC) to
CC tetrahydrodehydrodiconiferyl alcohol (TDDC). May regulate changes in
CC lignin content and accumulation of flavonoids.
CC {ECO:0000269|PubMed:23459862}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(-)-dehydrodiconiferyl alcohol + H(+) + NADPH = (S)-
CC isodihydrodehydrodiconiferyl alcohol + NADP(+); Xref=Rhea:RHEA:59440,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:57783, ChEBI:CHEBI:58349,
CC ChEBI:CHEBI:70467, ChEBI:CHEBI:143259;
CC Evidence={ECO:0000269|PubMed:23459862};
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(+)-dehydrodiconiferyl alcohol + H(+) + NADPH = (R)-
CC isodihydrodehydrodiconiferyl alcohol + NADP(+); Xref=Rhea:RHEA:59844,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:57783, ChEBI:CHEBI:58349,
CC ChEBI:CHEBI:143256, ChEBI:CHEBI:143260;
CC Evidence={ECO:0000269|PubMed:23459862};
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2R,3S)-dihydrodehydrodiconiferyl alcohol + H(+) + NADPH =
CC (S)-tetrahydrodehydrodiconiferyl alcohol + NADP(+);
CC Xref=Rhea:RHEA:59848, ChEBI:CHEBI:15378, ChEBI:CHEBI:57783,
CC ChEBI:CHEBI:58349, ChEBI:CHEBI:143258, ChEBI:CHEBI:143262;
CC Evidence={ECO:0000269|PubMed:23459862};
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2S,3R)-dihydrodehydrodiconiferyl alcohol + H(+) + NADPH =
CC (R)-tetrahydrodehydrodiconiferyl alcohol + NADP(+);
CC Xref=Rhea:RHEA:59852, ChEBI:CHEBI:15378, ChEBI:CHEBI:57783,
CC ChEBI:CHEBI:58349, ChEBI:CHEBI:143257, ChEBI:CHEBI:143263;
CC Evidence={ECO:0000269|PubMed:23459862};
CC -!- TISSUE SPECIFICITY: Highly expressed in sclerotesta. Expressed in
CC roots, and two-to-four year stems. {ECO:0000269|PubMed:23459862}.
CC -!- INDUCTION: Induced by UV-B, wounding, salicylate, ethephon, 5-
CC aminolevulinic acid and abscisic acid (ABA).
CC {ECO:0000269|PubMed:23459862}.
CC -!- SIMILARITY: Belongs to the NmrA-type oxidoreductase family. Isoflavone
CC reductase subfamily. {ECO:0000305}.
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DR EMBL; KC244282; AGG40646.1; -; mRNA.
DR AlphaFoldDB; M1T9X3; -.
DR SMR; M1T9X3; -.
DR BRENDA; 1.3.1.45; 2435.
DR GO; GO:0050664; F:oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor; IDA:UniProtKB.
DR GO; GO:0009807; P:lignan biosynthetic process; IDA:UniProtKB.
DR CDD; cd05259; PCBER_SDR_a; 1.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR008030; NmrA-like.
DR InterPro; IPR045312; PCBER-like.
DR Pfam; PF05368; NmrA; 1.
DR SUPFAM; SSF51735; SSF51735; 1.
PE 1: Evidence at protein level;
KW NADP; Oxidoreductase.
FT CHAIN 1..306
FT /note="Phenylcoumaran benzylic ether reductase IRL1"
FT /id="PRO_0000442618"
FT ACT_SITE 132
FT /note="Proton acceptor"
FT /evidence="ECO:0000250|UniProtKB:Q9LD14"
FT BINDING 10..16
FT /ligand="NADP(+)"
FT /ligand_id="ChEBI:CHEBI:58349"
FT /evidence="ECO:0000250|UniProtKB:Q9LD14"
FT BINDING 35
FT /ligand="NADP(+)"
FT /ligand_id="ChEBI:CHEBI:58349"
FT /evidence="ECO:0000250|UniProtKB:Q9LD14"
FT BINDING 44
FT /ligand="NADP(+)"
FT /ligand_id="ChEBI:CHEBI:58349"
FT /evidence="ECO:0000250|UniProtKB:Q9LD14"
FT BINDING 136
FT /ligand="NADP(+)"
FT /ligand_id="ChEBI:CHEBI:58349"
FT /evidence="ECO:0000250|UniProtKB:Q9LD14"
SQ SEQUENCE 306 AA; 33286 MW; 6E45A81687D62A62 CRC64;
MGKSRILIIG ATGYIGRQVA KASAALGHPT LILVRETTAS NPEKAQLLES FKSSGITIVH
GSLEDHASLV EAIKKVDVVI STVGGAQIAD QLNIIKAIKE VGTIKRFLPT EFGNDVDKTS
AVEPAKGLFA LKVKIRRAIE AEGIPYTYVS SNCFAGYFLP NLGQPGLTAP PRDKIVIFGD
GNAKAVFVKE EDIGTFTIKS VDDPRTLNKT LYLRLPANTF SFNELVALWE KKIGKTLEKV
YVPEEQVLKT IAETPFPGNI IISIAHSIFV KGDQTNFEIG DNGVEGSELY PDVKYTTVDE
YLNQFV