ITGBL_RAT
ID ITGBL_RAT Reviewed; 494 AA.
AC Q5PQQ8;
DT 18-MAR-2008, integrated into UniProtKB/Swiss-Prot.
DT 04-JAN-2005, sequence version 1.
DT 03-AUG-2022, entry version 116.
DE RecName: Full=Integrin beta-like protein 1;
DE Flags: Precursor;
GN Name=Itgbl1;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Testis;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000305}.
CC -!- DOMAIN: Contains ten tandem EGF-like repeats strikingly similar to
CC those found in the cysteine rich 'stalk-like' structure of integrin
CC beta-subunits.
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DR EMBL; BC087076; AAH87076.1; -; mRNA.
DR RefSeq; NP_001017505.1; NM_001017505.1.
DR AlphaFoldDB; Q5PQQ8; -.
DR STRING; 10116.ENSRNOP00000006264; -.
DR GlyGen; Q5PQQ8; 1 site.
DR PaxDb; Q5PQQ8; -.
DR Ensembl; ENSRNOT00000006264; ENSRNOP00000006264; ENSRNOG00000004516.
DR GeneID; 498564; -.
DR KEGG; rno:498564; -.
DR UCSC; RGD:1560635; rat.
DR CTD; 9358; -.
DR RGD; 1560635; Itgbl1.
DR eggNOG; KOG1226; Eukaryota.
DR GeneTree; ENSGT00980000198528; -.
DR HOGENOM; CLU_043045_0_0_1; -.
DR InParanoid; Q5PQQ8; -.
DR OMA; CGNDCKK; -.
DR OrthoDB; 18592at2759; -.
DR PhylomeDB; Q5PQQ8; -.
DR TreeFam; TF332636; -.
DR PRO; PR:Q5PQQ8; -.
DR Proteomes; UP000002494; Chromosome 15.
DR Bgee; ENSRNOG00000004516; Expressed in quadriceps femoris and 20 other tissues.
DR Genevisible; Q5PQQ8; RN.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0005925; C:focal adhesion; IBA:GO_Central.
DR GO; GO:0005178; F:integrin binding; IBA:GO_Central.
DR GO; GO:0033627; P:cell adhesion mediated by integrin; IBA:GO_Central.
DR GO; GO:0016477; P:cell migration; IBA:GO_Central.
DR GO; GO:0007160; P:cell-matrix adhesion; IBA:GO_Central.
DR GO; GO:0007229; P:integrin-mediated signaling pathway; IBA:GO_Central.
DR InterPro; IPR000742; EGF-like_dom.
DR InterPro; IPR013111; EGF_extracell.
DR InterPro; IPR027070; Integrin_b-like_p1.
DR InterPro; IPR015812; Integrin_bsu.
DR PANTHER; PTHR10082; PTHR10082; 1.
DR PANTHER; PTHR10082:SF3; PTHR10082:SF3; 1.
DR Pfam; PF07974; EGF_2; 4.
DR SMART; SM00181; EGF; 6.
DR PROSITE; PS00022; EGF_1; 5.
DR PROSITE; PS01186; EGF_2; 5.
DR PROSITE; PS00243; INTEGRIN_BETA; 9.
PE 2: Evidence at transcript level;
KW EGF-like domain; Glycoprotein; Reference proteome; Repeat; Secreted;
KW Signal.
FT SIGNAL 1..23
FT /evidence="ECO:0000255"
FT CHAIN 24..494
FT /note="Integrin beta-like protein 1"
FT /id="PRO_0000323024"
FT REPEAT 51..95
FT /note="I"
FT REPEAT 96..142
FT /note="II"
FT REPEAT 143..184
FT /note="III"
FT REPEAT 185..230
FT /note="IV"
FT REPEAT 231..275
FT /note="V"
FT REPEAT 276..326
FT /note="VI"
FT REPEAT 327..367
FT /note="VII"
FT REPEAT 368..414
FT /note="VIII"
FT REPEAT 415..454
FT /note="IX"
FT REPEAT 455..494
FT /note="X"
FT REGION 51..494
FT /note="Cysteine-rich tandem repeats"
FT CARBOHYD 405
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 494 AA; 53904 MW; 8A60A8CA4FADD366 CRC64;
MHPPGFKNFL LLVSSLFFIG LSAAPQSFSP SLRSLSGAPC RLSRAESERR CRAPGQPPGS
ALCHDRGRCE CGVCICHVTE PGTYFGPLCE CHDWVCETYD GKTCAGHGTC DCGKCKCDVG
WSGEACQYPT KCDLTKKISN QMCKNSQDVI CSNAGTCHCG RCKCDNSDGH GLIYGKFCEC
DDRECIDDET EEICGGHGKC YCGNCYCEAG WHGDKCEFQC DITPWESKRR CTSPDGKVCS
NRGTCVCGEC SCHDVDPTGD WGDIHGDTCE CDERDCRAVY DRYSDDFCSG HGQCNCGRCD
CRAGWYGKKC EHPKNCPLSA EESTRKCQGS SDLPCSGRGR CECGRCTCYP PGDSRVYGKT
CECDDRRCED LDGVVCGGRG TCSCGRCVCE KGWFGKLCQH PRKCNMTEEQ SRSLCESADG
TLCSGKGSCH CGKCICSGEE WYISGEFCDC DDRDCDKHDG LICTGNGICS CGNCECWDGW
NGNACEIWLG TEYP