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JAK1_DANRE
ID   JAK1_DANRE              Reviewed;        1153 AA.
AC   O12990; O73880;
DT   27-MAY-2002, integrated into UniProtKB/Swiss-Prot.
DT   01-JUL-1997, sequence version 1.
DT   03-AUG-2022, entry version 151.
DE   RecName: Full=Tyrosine-protein kinase JAK1;
DE            EC=2.7.10.2;
DE   AltName: Full=Janus kinase 1;
DE            Short=JAK-1;
GN   Name=jak1;
OS   Danio rerio (Zebrafish) (Brachydanio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Danionidae; Danioninae; Danio.
OX   NCBI_TaxID=7955;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], DEVELOPMENTAL STAGE, MUTAGENESIS OF LYS-905,
RP   AND FUNCTION.
RC   TISSUE=Embryo;
RX   PubMed=9096349; DOI=10.1073/pnas.94.7.3082;
RA   Conway G., Margoliath A., Wong-Madden S., Roberts R.J., Gilbert W.;
RT   "Jak1 kinase is required for cell migrations and anterior specification in
RT   zebrafish embryos.";
RL   Proc. Natl. Acad. Sci. U.S.A. 94:3082-3087(1997).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [MRNA] OF 443-1153.
RC   TISSUE=Embryo;
RX   PubMed=10515866;
RA   Oates A.C., Brownlie A., Pratt S.J., Irvine D.V., Liao E.C., Paw B.H.,
RA   Dorian K.J., Johnson S.L., Postlethwait J.H., Zon L.I., Wilks A.F.;
RT   "Gene duplication of zebrafish JAK2 homologs is accompanied by divergent
RT   embryonic expression patterns: only jak2a is expressed during
RT   erythropoiesis.";
RL   Blood 94:2622-2636(1999).
CC   -!- FUNCTION: Tyrosine kinase of the non-receptor type. Appears to be
CC       required in early development for specific cell migrations (epiboly),
CC       expression of homeobox protein goosecoid and formation of anterior
CC       structures. {ECO:0000269|PubMed:9096349}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + L-tyrosyl-[protein] = ADP + H(+) + O-phospho-L-tyrosyl-
CC         [protein]; Xref=Rhea:RHEA:10596, Rhea:RHEA-COMP:10136, Rhea:RHEA-
CC         COMP:10137, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, ChEBI:CHEBI:46858,
CC         ChEBI:CHEBI:82620, ChEBI:CHEBI:456216; EC=2.7.10.2;
CC         Evidence={ECO:0000255|PROSITE-ProRule:PRU10028};
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000305};
CC       Note=Mn(2+) was used in the in vitro kinase assay but Mg(2+) is likely
CC       to be the in vivo cofactor. {ECO:0000305};
CC   -!- SUBCELLULAR LOCATION: Endomembrane system {ECO:0000250}; Peripheral
CC       membrane protein {ECO:0000250}. Note=Wholly intracellular, possibly
CC       membrane associated. {ECO:0000250}.
CC   -!- DEVELOPMENTAL STAGE: Present in the unfertilized egg through to the
CC       blastula stage where it is distributed uniformly. Levels drop rapidly
CC       at four hours development, remain very low until 10 hours, then
CC       gradually increase from 12 hours with a rapid increase at 48 hours. At
CC       48 hours it is concentrated in the region of the gill arches. Also
CC       present in the adult. {ECO:0000269|PubMed:9096349}.
CC   -!- DOMAIN: Possesses two phosphotransferase domains. The second one
CC       probably contains the catalytic domain, while the presence of slight
CC       differences suggest a different role for domain 1.
CC   -!- DOMAIN: The protein kinase 1 domain is also called the pseudokinase
CC       domain and has a regulatory role through the transactivation of other
CC       JAK kinases associated with signaling receptors.
CC       {ECO:0000250|UniProtKB:P23458}.
CC   -!- DOMAIN: The protein kinase 2 domain is the catalytically active domain.
CC       {ECO:0000250|UniProtKB:P23458}.
CC   -!- SIMILARITY: Belongs to the protein kinase superfamily. Tyr protein
CC       kinase family. JAK subfamily. {ECO:0000255|PROSITE-ProRule:PRU00159}.
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DR   EMBL; U82980; AAB54114.1; -; mRNA.
DR   EMBL; AJ005689; CAA06673.1; -; mRNA.
DR   AlphaFoldDB; O12990; -.
DR   SMR; O12990; -.
DR   STRING; 7955.ENSDARP00000037399; -.
DR   PaxDb; O12990; -.
DR   PRIDE; O12990; -.
DR   ZFIN; ZDB-GENE-980526-142; jak1.
DR   eggNOG; KOG0197; Eukaryota.
DR   InParanoid; O12990; -.
DR   BRENDA; 2.7.10.2; 928.
DR   Reactome; R-DRE-1059683; Interleukin-6 signaling.
DR   Reactome; R-DRE-110056; MAPK3 (ERK1) activation.
DR   Reactome; R-DRE-112411; MAPK1 (ERK2) activation.
DR   Reactome; R-DRE-1266695; Interleukin-7 signaling.
DR   Reactome; R-DRE-6783783; Interleukin-10 signaling.
DR   Reactome; R-DRE-6785807; Interleukin-4 and Interleukin-13 signaling.
DR   Reactome; R-DRE-6788467; IL-6-type cytokine receptor ligand interactions.
DR   Reactome; R-DRE-877300; Interferon gamma signaling.
DR   Reactome; R-DRE-877312; Regulation of IFNG signaling.
DR   Reactome; R-DRE-8854691; Interleukin-20 family signaling.
DR   Reactome; R-DRE-8983432; Interleukin-15 signaling.
DR   Reactome; R-DRE-8984722; Interleukin-35 Signalling.
DR   Reactome; R-DRE-8985947; Interleukin-9 signaling.
DR   Reactome; R-DRE-9020558; Interleukin-2 signaling.
DR   Reactome; R-DRE-9020591; Interleukin-12 signaling.
DR   Reactome; R-DRE-9020956; Interleukin-27 signaling.
DR   Reactome; R-DRE-9020958; Interleukin-21 signaling.
DR   Reactome; R-DRE-909733; Interferon alpha/beta signaling.
DR   Reactome; R-DRE-912526; Interleukin receptor SHC signaling.
DR   Reactome; R-DRE-912694; Regulation of IFNA/IFNB signaling.
DR   Reactome; R-DRE-9674555; Signaling by CSF3 (G-CSF).
DR   Reactome; R-DRE-9705462; Inactivation of CSF3 (G-CSF) signaling.
DR   SignaLink; O12990; -.
DR   ChiTaRS; jak1; zebrafish.
DR   PRO; PR:O12990; -.
DR   Proteomes; UP000000437; Genome assembly.
DR   Proteomes; UP000814640; Unplaced.
DR   GO; GO:0005856; C:cytoskeleton; IEA:InterPro.
DR   GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR   GO; GO:0012505; C:endomembrane system; IEA:UniProtKB-SubCell.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0005126; F:cytokine receptor binding; IBA:GO_Central.
DR   GO; GO:0005131; F:growth hormone receptor binding; IBA:GO_Central.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0004715; F:non-membrane spanning protein tyrosine kinase activity; IBA:GO_Central.
DR   GO; GO:0030154; P:cell differentiation; IBA:GO_Central.
DR   GO; GO:0019221; P:cytokine-mediated signaling pathway; IBA:GO_Central.
DR   GO; GO:0060397; P:growth hormone receptor signaling pathway via JAK-STAT; IBA:GO_Central.
DR   GO; GO:0035556; P:intracellular signal transduction; IBA:GO_Central.
DR   GO; GO:0006468; P:protein phosphorylation; ISS:UniProtKB.
DR   GO; GO:0007259; P:receptor signaling pathway via JAK-STAT; ISS:UniProtKB.
DR   GO; GO:0033077; P:T cell differentiation in thymus; IMP:ZFIN.
DR   GO; GO:0007260; P:tyrosine phosphorylation of STAT protein; IBA:GO_Central.
DR   Gene3D; 3.30.505.10; -; 1.
DR   InterPro; IPR019749; Band_41_domain.
DR   InterPro; IPR035963; FERM_2.
DR   InterPro; IPR000299; FERM_domain.
DR   InterPro; IPR041155; FERM_F1.
DR   InterPro; IPR041046; FERM_F2.
DR   InterPro; IPR041381; JAK1-3/TYK2_PHL_dom.
DR   InterPro; IPR011009; Kinase-like_dom_sf.
DR   InterPro; IPR000719; Prot_kinase_dom.
DR   InterPro; IPR017441; Protein_kinase_ATP_BS.
DR   InterPro; IPR001245; Ser-Thr/Tyr_kinase_cat_dom.
DR   InterPro; IPR000980; SH2.
DR   InterPro; IPR036860; SH2_dom_sf.
DR   InterPro; IPR008266; Tyr_kinase_AS.
DR   InterPro; IPR020635; Tyr_kinase_cat_dom.
DR   InterPro; IPR016251; Tyr_kinase_non-rcpt_Jak/Tyk2.
DR   InterPro; IPR020776; Tyr_kinase_non-rcpt_Jak1.
DR   Pfam; PF18379; FERM_F1; 1.
DR   Pfam; PF18377; FERM_F2; 1.
DR   Pfam; PF17887; Jak1_Phl; 1.
DR   Pfam; PF07714; PK_Tyr_Ser-Thr; 2.
DR   PIRSF; PIRSF000636; TyrPK_Jak; 1.
DR   PRINTS; PR01823; JANUSKINASE.
DR   PRINTS; PR01824; JANUSKINASE1.
DR   PRINTS; PR00109; TYRKINASE.
DR   SMART; SM00295; B41; 1.
DR   SMART; SM00252; SH2; 1.
DR   SMART; SM00219; TyrKc; 2.
DR   SUPFAM; SSF47031; SSF47031; 1.
DR   SUPFAM; SSF55550; SSF55550; 1.
DR   SUPFAM; SSF56112; SSF56112; 2.
DR   PROSITE; PS50057; FERM_3; 1.
DR   PROSITE; PS00107; PROTEIN_KINASE_ATP; 1.
DR   PROSITE; PS50011; PROTEIN_KINASE_DOM; 2.
DR   PROSITE; PS00109; PROTEIN_KINASE_TYR; 1.
PE   1: Evidence at protein level;
KW   ATP-binding; Developmental protein; Kinase; Magnesium; Membrane;
KW   Metal-binding; Nucleotide-binding; Phosphoprotein; Reference proteome;
KW   Repeat; SH2 domain; Transferase; Tyrosine-protein kinase.
FT   CHAIN           1..1153
FT                   /note="Tyrosine-protein kinase JAK1"
FT                   /id="PRO_0000088110"
FT   DOMAIN          32..416
FT                   /note="FERM"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00084"
FT   DOMAIN          435..540
FT                   /note="SH2; atypical"
FT   DOMAIN          580..846
FT                   /note="Protein kinase 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   DOMAIN          872..1150
FT                   /note="Protein kinase 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   ACT_SITE        1000
FT                   /note="Proton acceptor"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159,
FT                   ECO:0000255|PROSITE-ProRule:PRU10028"
FT   BINDING         878..886
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT   BINDING         905
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT   MOD_RES         1031
FT                   /note="Phosphotyrosine; by autocatalysis"
FT                   /evidence="ECO:0000250"
FT   MOD_RES         1032
FT                   /note="Phosphotyrosine; by autocatalysis"
FT                   /evidence="ECO:0000250"
FT   MUTAGEN         905
FT                   /note="K->E: Loss of autophosphorylation and defects in
FT                   early development."
FT                   /evidence="ECO:0000269|PubMed:9096349"
FT   CONFLICT        649
FT                   /note="T -> I (in Ref. 2; CAA06673)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        770
FT                   /note="T -> S (in Ref. 2; CAA06673)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        799
FT                   /note="S -> T (in Ref. 2; CAA06673)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        978
FT                   /note="H -> L (in Ref. 2; CAA06673)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        1111
FT                   /note="L -> I (in Ref. 2; CAA06673)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   1153 AA;  132481 MW;  736D5263D03E7450 CRC64;
     MPELAVMDLG RQLCVKMKKQ RKAEMTIPTA MKGLEIHFYL ADTHQLEFFK ACYTAEDLCV
     EAAKRCRISP LCHNLFALYE ESQDLWYAPN HVFKVTDETS IKLHYRMRFY FTNWHGTSEI
     ESPVWRHTLS KQKSVLNSQK TTEGTPLLDA ASLDYLFAQG QYDFLRGLSP VRPTQTDEEH
     HEIENECLGM AVLAITHHAK SNNLPLSGAG AETSYKRFIP DSLNRTIKQR NFLTRIRISN
     VFKNFLNEFN SKTIQDSNIG LYDLKVKYLS TLETLTQGVG REIFKPKNLK VTGESEGSPA
     QMLPLGDNGM GYEVQVYGTT GISWRRKPAP NQLILKDKPK SKKIKGDKQW NDKKKDSGWT
     LFSDFHEITH IVIKDCCVTI YRQDNKTMEL DLFYRDAALS FAALVDGYFR LTVDAHHYLC
     TDVAPSSVVQ NLENGCHGPI CTEYAIHKLR QEGNEEGTYV LRWSCTEYNF IIMTVVCIEL
     DLCESRPVPQ YKNFQIETSP QGYRLYGTDT FRPTLKELLE HLQGQLLRTD NLRFQLRRCC
     PPQPREISNL LVMTTDREPV PQKKTQVSQL SFDRILKEEI VQGEHLGRGT RTNIYAGILK
     PKSDDEDDLG GYSQEVKVVL KVLGSGHRDI SLAFFETASM MRQISHKHTA LLYGVCVRHQ
     ENIMVEEFVQ YGPLDLFMRR QTTPLSTAWK FQVAKQLASA LSYLEDKKMV HGYVCSKNIL
     VARDGLDGEG GPFIKLSDPG IPITVLSREE CVDRIPWIAP ECVKDTANLT IAADKWSFGT
     TLWEICYNGE IPLKDKKLSE KERFYAAQCQ LATPDCDELA KLMTHCMTYD PRQRLFFRAI
     VRDIVMVEKQ NPSIQPVPML EVDPTVFEKR FLKKIRDLGE GHFGKVELCR YDPRGDRTGE
     LVAVKSLKPE NREEQSNNLW REIHILRELY HENIVKYKGI CNEEGGRSIK LIMEFLPAGS
     LKEYLPRNKA HINLKTLHNY SVQICQGMDY LGSRNYIHRD LAARNVLVEN EGTVKIGDFG
     LTKSIKDNEG YYTVKDDLDS PVFWYAPECL IHCKFYRASD VWSFGVTMYE LLTYCDASCS
     PMSVFLKLIG PTHGQMTVTR LVKVLEEGKR LPRPDDCSEQ LYNLMRRCWE ATPEKRIDFK
     SLIANFQQML DNL
 
 
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