JAL12_ARATH
ID JAL12_ARATH Reviewed; 459 AA.
AC Q0WMR0; Q6NQK1; Q9ZU14;
DT 01-OCT-2014, integrated into UniProtKB/Swiss-Prot.
DT 05-SEP-2006, sequence version 1.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Jacalin-related lectin 12;
GN Name=JAL12; OrderedLocusNames=At1g52120; ORFNames=F5F19.18;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA Hayashizaki Y., Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 10-459.
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=18467340; DOI=10.1093/pcp/pcn075;
RA Nagano A.J., Fukao Y., Fujiwara M., Nishimura M., Hara-Nishimura I.;
RT "Antagonistic jacalin-related lectins regulate the size of ER body-type
RT beta-glucosidase complexes in Arabidopsis thaliana.";
RL Plant Cell Physiol. 49:969-980(2008).
CC -!- SIMILARITY: Belongs to the jacalin lectin family. {ECO:0000255|PROSITE-
CC ProRule:PRU01088, ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAD12686.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
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DR EMBL; AC006216; AAD12686.1; ALT_INIT; Genomic_DNA.
DR EMBL; CP002684; AEE32757.1; -; Genomic_DNA.
DR EMBL; CP002684; ANM61114.1; -; Genomic_DNA.
DR EMBL; AK229754; BAF01590.1; -; mRNA.
DR EMBL; BT010452; AAQ62872.1; -; mRNA.
DR PIR; B96561; B96561.
DR RefSeq; NP_001323351.1; NM_001333528.1.
DR RefSeq; NP_175624.2; NM_104093.4.
DR AlphaFoldDB; Q0WMR0; -.
DR SMR; Q0WMR0; -.
DR BioGRID; 26867; 1.
DR STRING; 3702.AT1G52120.1; -.
DR iPTMnet; Q0WMR0; -.
DR PaxDb; Q0WMR0; -.
DR PRIDE; Q0WMR0; -.
DR ProteomicsDB; 232256; -.
DR EnsemblPlants; AT1G52120.1; AT1G52120.1; AT1G52120.
DR EnsemblPlants; AT1G52120.2; AT1G52120.2; AT1G52120.
DR GeneID; 841642; -.
DR Gramene; AT1G52120.1; AT1G52120.1; AT1G52120.
DR Gramene; AT1G52120.2; AT1G52120.2; AT1G52120.
DR KEGG; ath:AT1G52120; -.
DR Araport; AT1G52120; -.
DR TAIR; locus:2034021; AT1G52120.
DR eggNOG; ENOG502SDKK; Eukaryota.
DR HOGENOM; CLU_732272_0_0_1; -.
DR InParanoid; Q0WMR0; -.
DR OrthoDB; 1319137at2759; -.
DR PhylomeDB; Q0WMR0; -.
DR PRO; PR:Q0WMR0; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q0WMR0; baseline and differential.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProtKB-KW.
DR CDD; cd09612; Jacalin; 3.
DR Gene3D; 2.100.10.30; -; 3.
DR InterPro; IPR001229; Jacalin-like_lectin_dom.
DR InterPro; IPR033734; Jacalin-like_lectin_dom_plant.
DR InterPro; IPR036404; Jacalin-like_lectin_dom_sf.
DR Pfam; PF01419; Jacalin; 3.
DR SMART; SM00915; Jacalin; 3.
DR SUPFAM; SSF51101; SSF51101; 3.
DR PROSITE; PS51752; JACALIN_LECTIN; 3.
PE 2: Evidence at transcript level;
KW Lectin; Reference proteome; Repeat.
FT CHAIN 1..459
FT /note="Jacalin-related lectin 12"
FT /id="PRO_0000430379"
FT DOMAIN 2..148
FT /note="Jacalin-type lectin 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01088"
FT DOMAIN 151..296
FT /note="Jacalin-type lectin 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01088"
FT DOMAIN 298..443
FT /note="Jacalin-type lectin 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01088"
FT CONFLICT 332
FT /note="V -> A (in Ref. 4; AAQ62872)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 459 AA; 50909 MW; 952EF2656EFA4D8F CRC64;
MSQDSNALEM IQNEGPKWDD GFDHDDVTKI YLVGGKTGID FIKIDYVKSG KPKNGPFHGY
SGGGFLQMFE IDNLKNEYLE SVEGYYTNRS GEFIGAIQFK TNLRVSEIIG YSYWGLKKFK
LAKHGNKIIG FQGSAEYRLK DLDAYFTPIT PTRMEAQGGN GGTKWDDGGD HDSVTKIQVR
INKEGIQYIK FNYVDKDGDP EKEQLHGSET GRGYTLEPFE INHSDKEYLL SIDGCYDEDS
GVIQSLQLKT NIKTSEVMGD DEKGTKFTLG CNGHEIIGFH GSAQDNLNAL GAYITTLTLT
KLEYIGEGSD IWDDGTFEGV KKVSFYHNDG IVRCIEFDYV KDGKIETRVQ GGKRGTGDFT
KEEFTVDYPN EFLTSVEGTY RDNPGGTLIT SLTFKTSNNR TSPILGKASN KTFLLESKGC
ALVGFHGASS DFFLYALGAY SFPMTSLAEA GRGAIHTSW
