JAL20_ARATH
ID JAL20_ARATH Reviewed; 449 AA.
AC O80998;
DT 11-JAN-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1998, sequence version 1.
DT 03-AUG-2022, entry version 117.
DE RecName: Full=Jacalin-related lectin 20;
DE AltName: Full=Myrosinase-binding protein-like At2g25980;
GN Name=JAL20; OrderedLocusNames=At2g25980; ORFNames=T19L18.21;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=18467340; DOI=10.1093/pcp/pcn075;
RA Nagano A.J., Fukao Y., Fujiwara M., Nishimura M., Hara-Nishimura I.;
RT "Antagonistic jacalin-related lectins regulate the size of ER body-type
RT beta-glucosidase complexes in Arabidopsis thaliana.";
RL Plant Cell Physiol. 49:969-980(2008).
CC -!- SIMILARITY: Belongs to the jacalin lectin family. {ECO:0000255|PROSITE-
CC ProRule:PRU01088, ECO:0000305}.
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DR EMBL; AC004747; AAC31237.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC07779.1; -; Genomic_DNA.
DR EMBL; AY078966; AAL84963.1; -; mRNA.
DR EMBL; AY133579; AAM91409.1; -; mRNA.
DR PIR; T02625; T02625.
DR RefSeq; NP_180168.1; NM_128157.4.
DR AlphaFoldDB; O80998; -.
DR SMR; O80998; -.
DR BioGRID; 2491; 8.
DR IntAct; O80998; 5.
DR STRING; 3702.AT2G25980.1; -.
DR MetOSite; O80998; -.
DR PaxDb; O80998; -.
DR PRIDE; O80998; -.
DR ProteomicsDB; 232287; -.
DR EnsemblPlants; AT2G25980.1; AT2G25980.1; AT2G25980.
DR GeneID; 817139; -.
DR Gramene; AT2G25980.1; AT2G25980.1; AT2G25980.
DR KEGG; ath:AT2G25980; -.
DR Araport; AT2G25980; -.
DR TAIR; locus:2057391; AT2G25980.
DR HOGENOM; CLU_041730_0_0_1; -.
DR InParanoid; O80998; -.
DR OMA; GADHENV; -.
DR OrthoDB; 787958at2759; -.
DR PhylomeDB; O80998; -.
DR PRO; PR:O80998; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; O80998; baseline and differential.
DR Genevisible; O80998; AT.
DR GO; GO:0009506; C:plasmodesma; HDA:TAIR.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProtKB-KW.
DR CDD; cd09612; Jacalin; 3.
DR Gene3D; 2.100.10.30; -; 3.
DR InterPro; IPR001229; Jacalin-like_lectin_dom.
DR InterPro; IPR033734; Jacalin-like_lectin_dom_plant.
DR InterPro; IPR036404; Jacalin-like_lectin_dom_sf.
DR Pfam; PF01419; Jacalin; 3.
DR SMART; SM00915; Jacalin; 3.
DR SUPFAM; SSF51101; SSF51101; 3.
DR PROSITE; PS51752; JACALIN_LECTIN; 3.
PE 2: Evidence at transcript level;
KW Acetylation; Lectin; Reference proteome; Repeat.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250|UniProtKB:Q9FGC5"
FT CHAIN 2..449
FT /note="Jacalin-related lectin 20"
FT /id="PRO_0000072792"
FT DOMAIN 2..144
FT /note="Jacalin-type lectin 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01088"
FT DOMAIN 147..294
FT /note="Jacalin-type lectin 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01088"
FT DOMAIN 303..446
FT /note="Jacalin-type lectin 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01088"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 294..314
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 2
FT /note="N-acetylalanine"
FT /evidence="ECO:0000250|UniProtKB:Q9FGC5"
SQ SEQUENCE 449 AA; 48979 MW; 65E148E4A9658866 CRC64;
MAQRLEAKGG KGGNQWDDGA DHENVTKIHV RGGLEGIQFI KFEYVKAGQT VVGPIHGVSG
KGFTQTFEIN HLNGEHVVSV KGCYDNISGV IQALQFETNQ RSSEVMGYDD TGTKFTLEIS
GNKITGFHGS ADANLKSLGA YFTPPPPIKQ EYQGGTGGSP WDHGIYTGIR KVYVTFSPVS
ISHIKVDYDK DGKVETRQDG DMLGENRVQG QPNEFVVDYP YEYITSIEVT CDKVSGNTNR
VRSLSFKTSK DRTSPTYGRK SERTFVFESK GRALVGLHGR CCWAIDALGA HFGAPPIPPP
PPTEKLQGSG GDGGESWDDG AFDGVRKIYV GQGENGIASV KFVYDKNNQL VLGEEHGKHT
LLGYEEFELD YPSEYITAVE GYYDKVFGSE SSVIVMLKFK TNKRTSPPYG MDAGVSFILG
KEGHKVVGFH GKASPELYQI GVTVAPITK
