JAL25_ARATH
ID JAL25_ARATH Reviewed; 309 AA.
AC O22829; Q5XVC6;
DT 01-OCT-2014, integrated into UniProtKB/Swiss-Prot.
DT 01-JAN-1998, sequence version 1.
DT 25-MAY-2022, entry version 119.
DE RecName: Full=Jacalin-related lectin 25;
GN Name=JAL25; OrderedLocusNames=At2g43740; ORFNames=F18O19.15;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC STRAIN=cv. Columbia;
RX PubMed=16244158; DOI=10.1104/pp.105.063479;
RA Xiao Y.-L., Smith S.R., Ishmael N., Redman J.C., Kumar N., Monaghan E.L.,
RA Ayele M., Haas B.J., Wu H.C., Town C.D.;
RT "Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2
RT reveals numerous transcript variants.";
RL Plant Physiol. 139:1323-1337(2005).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=18467340; DOI=10.1093/pcp/pcn075;
RA Nagano A.J., Fukao Y., Fujiwara M., Nishimura M., Hara-Nishimura I.;
RT "Antagonistic jacalin-related lectins regulate the size of ER body-type
RT beta-glucosidase complexes in Arabidopsis thaliana.";
RL Plant Cell Physiol. 49:969-980(2008).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=O22829-1; Sequence=Displayed;
CC Name=2;
CC IsoId=O22829-2; Sequence=VSP_056717;
CC -!- SIMILARITY: Belongs to the jacalin lectin family. {ECO:0000255|PROSITE-
CC ProRule:PRU01088, ECO:0000305}.
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DR EMBL; AC002333; AAB64032.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC10314.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC10315.1; -; Genomic_DNA.
DR EMBL; AY735597; AAU44467.1; -; mRNA.
DR EMBL; AY735596; AAU44466.1; -; mRNA.
DR EMBL; AY954835; AAX55161.1; -; mRNA.
DR PIR; H84869; H84869.
DR RefSeq; NP_001031536.1; NM_001036459.1. [O22829-2]
DR RefSeq; NP_181902.1; NM_129936.2. [O22829-1]
DR AlphaFoldDB; O22829; -.
DR PaxDb; O22829; -.
DR PRIDE; O22829; -.
DR ProteomicsDB; 232288; -. [O22829-1]
DR EnsemblPlants; AT2G43740.1; AT2G43740.1; AT2G43740. [O22829-1]
DR EnsemblPlants; AT2G43740.2; AT2G43740.2; AT2G43740. [O22829-2]
DR GeneID; 818976; -.
DR Gramene; AT2G43740.1; AT2G43740.1; AT2G43740. [O22829-1]
DR Gramene; AT2G43740.2; AT2G43740.2; AT2G43740. [O22829-2]
DR KEGG; ath:AT2G43740; -.
DR Araport; AT2G43740; -.
DR TAIR; locus:2043984; AT2G43740.
DR eggNOG; ENOG502S91T; Eukaryota.
DR HOGENOM; CLU_076205_0_0_1; -.
DR InParanoid; O22829; -.
DR OMA; TNLCNIQ; -.
DR OrthoDB; 1336028at2759; -.
DR PhylomeDB; O22829; -.
DR PRO; PR:O22829; -.
DR Proteomes; UP000006548; Chromosome 2.
DR Genevisible; O22829; AT.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProtKB-KW.
DR Gene3D; 2.100.10.30; -; 1.
DR InterPro; IPR001229; Jacalin-like_lectin_dom.
DR InterPro; IPR036404; Jacalin-like_lectin_dom_sf.
DR SMART; SM00915; Jacalin; 1.
DR SUPFAM; SSF51101; SSF51101; 1.
DR PROSITE; PS51752; JACALIN_LECTIN; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Lectin; Reference proteome.
FT CHAIN 1..309
FT /note="Jacalin-related lectin 25"
FT /id="PRO_0000430389"
FT DOMAIN 8..190
FT /note="Jacalin-type lectin"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01088"
FT VAR_SEQ 86..104
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:16244158, ECO:0000303|Ref.4"
FT /id="VSP_056717"
SQ SEQUENCE 309 AA; 35585 MW; 5A0A8CAB7B2402B2 CRC64;
MKSRGREMFK VGPIGSQRAY LKNLEWEEKG RNMISSIYVA FDKDTINSIQ FSYCQNGGHV
VSKKYGMSDA QKQKYGSYNG RFHVMFVFAL VTDDHVKTNL CNIQVRLNDD EFVTGLSAIY
LCKGITNLNI HTNQGKHGPI CDRYSSSKNI MDNYKVEIDV KIRDRREFGG FFGSFDNYGT
LTSIGIYVCP ITRINDVALR TNYKVTDDYD DQSTFYQSSG PLTTINHNRK LEYQMPHEVS
DVKPIVHNPN FEDKISLYQS SDRLARSTNT RTLEYQIPEF LDVNPIGRKS KLKYGIFSKL
ARLFRNLLD
