JAL26_ARATH
ID JAL26_ARATH Reviewed; 155 AA.
AC Q84X12; F4IS38; Q84X13;
DT 01-OCT-2014, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 67.
DE RecName: Full=Probable jacalin-related lectin 26;
GN Name=JAL26; OrderedLocusNames=At2g43745; ORFNames=F18O19.33;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC STRAIN=cv. Columbia;
RX PubMed=12481096; DOI=10.1104/pp.010207;
RA Xiao Y.-L., Malik M., Whitelaw C.A., Town C.D.;
RT "Cloning and sequencing of cDNAs for hypothetical genes from chromosome 2
RT of Arabidopsis.";
RL Plant Physiol. 130:2118-2128(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=18467340; DOI=10.1093/pcp/pcn075;
RA Nagano A.J., Fukao Y., Fujiwara M., Nishimura M., Hara-Nishimura I.;
RT "Antagonistic jacalin-related lectins regulate the size of ER body-type
RT beta-glucosidase complexes in Arabidopsis thaliana.";
RL Plant Cell Physiol. 49:969-980(2008).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q84X12-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q84X12-2; Sequence=VSP_056718;
CC -!- SIMILARITY: Belongs to the jacalin lectin family. {ECO:0000255|PROSITE-
CC ProRule:PRU01088, ECO:0000305}.
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DR EMBL; AC002333; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002685; AEC10316.2; -; Genomic_DNA.
DR EMBL; AY219095; AAO37182.1; -; mRNA.
DR EMBL; AY219096; AAO37183.1; -; mRNA.
DR EMBL; AY954836; AAX55162.1; -; Genomic_DNA.
DR RefSeq; NP_850401.5; NM_180070.4. [Q84X12-2]
DR AlphaFoldDB; Q84X12; -.
DR PaxDb; Q84X12; -.
DR PRIDE; Q84X12; -.
DR EnsemblPlants; AT2G43745.1; AT2G43745.1; AT2G43745. [Q84X12-2]
DR GeneID; 818977; -.
DR Gramene; AT2G43745.1; AT2G43745.1; AT2G43745. [Q84X12-2]
DR KEGG; ath:AT2G43745; -.
DR Araport; AT2G43745; -.
DR TAIR; locus:504956060; AT2G43745.
DR OrthoDB; 1336028at2759; -.
DR PRO; PR:Q84X12; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q84X12; baseline and differential.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProtKB-KW.
DR Gene3D; 2.100.10.30; -; 1.
DR InterPro; IPR001229; Jacalin-like_lectin_dom.
DR InterPro; IPR036404; Jacalin-like_lectin_dom_sf.
DR PROSITE; PS51752; JACALIN_LECTIN; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Lectin; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..155
FT /note="Probable jacalin-related lectin 26"
FT /id="PRO_0000430390"
FT TRANSMEM 26..48
FT /note="Helical; Name=1"
FT /evidence="ECO:0000255"
FT TRANSMEM 127..149
FT /note="Helical; Name=2"
FT /evidence="ECO:0000255"
FT DOMAIN 47..155
FT /note="Jacalin-type lectin"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01088"
FT VAR_SEQ 127..155
FT /note="VSFVSITIIYFCVCVRSGQVLFLMKFKRS -> LRLNQDEYVT (in
FT isoform 2)"
FT /evidence="ECO:0000303|PubMed:12481096"
FT /id="VSP_056718"
SQ SEQUENCE 155 AA; 17610 MW; 22105D664DD83217 CRC64;
MESINESYDD SSSFGQDSLL YNRPFAYLYL SFHLKLLYSV PASYIAMIRA GSVGKKSTCE
YTYWDDGVGE EVMGDDSWDY EGRKISHIYV AFDEVIMSIQ FGFLENGALV LSKQHGGIEE
GSNFRVVSFV SITIIYFCVC VRSGQVLFLM KFKRS