JAL34_ARATH
ID JAL34_ARATH Reviewed; 705 AA.
AC O04310; Q3E6V7; Q56W96;
DT 01-OCT-2014, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-1997, sequence version 1.
DT 25-MAY-2022, entry version 148.
DE RecName: Full=Jacalin-related lectin 34;
GN Name=JAL34; OrderedLocusNames=At3g16460; ORFNames=T02O04.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 319-705.
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC TISSUE=Root;
RX PubMed=18433157; DOI=10.1021/pr8000173;
RA de la Fuente van Bentem S., Anrather D., Dohnal I., Roitinger E.,
RA Csaszar E., Joore J., Buijnink J., Carreri A., Forzani C., Lorkovic Z.J.,
RA Barta A., Lecourieux D., Verhounig A., Jonak C., Hirt H.;
RT "Site-specific phosphorylation profiling of Arabidopsis proteins by mass
RT spectrometry and peptide chip analysis.";
RL J. Proteome Res. 7:2458-2470(2008).
RN [7]
RP IDENTIFICATION IN THE PYK10 COMPLEX, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=18467340; DOI=10.1093/pcp/pcn075;
RA Nagano A.J., Fukao Y., Fujiwara M., Nishimura M., Hara-Nishimura I.;
RT "Antagonistic jacalin-related lectins regulate the size of ER body-type
RT beta-glucosidase complexes in Arabidopsis thaliana.";
RL Plant Cell Physiol. 49:969-980(2008).
CC -!- SUBUNIT: Component of the PYK10 complex, at least composed of
CC PYK10/BGLU23, BGLU21, BGLU22, JAL22, JAL23, PBP1/JAL30, PBP2/JAL31,
CC JAL32, JAL33, JAL34, JAL35, GLL22 and GLL23.
CC {ECO:0000269|PubMed:18467340}.
CC -!- SIMILARITY: Belongs to the jacalin lectin family. {ECO:0000255|PROSITE-
CC ProRule:PRU01088, ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAD95226.1; Type=Erroneous initiation; Note=Truncated N-terminus.; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AP000373; BAB01145.1; -; Genomic_DNA.
DR EMBL; AC001645; AAB63631.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE75820.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE75821.1; -; Genomic_DNA.
DR EMBL; AY035108; AAK59613.1; -; mRNA.
DR EMBL; BT001000; AAN41400.1; -; mRNA.
DR EMBL; AK222150; BAD95226.1; ALT_INIT; mRNA.
DR RefSeq; NP_188267.1; NM_112517.4.
DR RefSeq; NP_974324.2; NM_202595.3.
DR AlphaFoldDB; O04310; -.
DR SMR; O04310; -.
DR BioGRID; 6228; 6.
DR IntAct; O04310; 4.
DR STRING; 3702.AT3G16460.2; -.
DR iPTMnet; O04310; -.
DR PaxDb; O04310; -.
DR PRIDE; O04310; -.
DR ProteomicsDB; 238972; -.
DR EnsemblPlants; AT3G16460.1; AT3G16460.1; AT3G16460.
DR EnsemblPlants; AT3G16460.2; AT3G16460.2; AT3G16460.
DR GeneID; 820894; -.
DR Gramene; AT3G16460.1; AT3G16460.1; AT3G16460.
DR Gramene; AT3G16460.2; AT3G16460.2; AT3G16460.
DR KEGG; ath:AT3G16460; -.
DR Araport; AT3G16460; -.
DR TAIR; locus:2088374; AT3G16460.
DR HOGENOM; CLU_011922_0_0_1; -.
DR InParanoid; O04310; -.
DR OMA; NHPDEYL; -.
DR OrthoDB; 456917at2759; -.
DR PhylomeDB; O04310; -.
DR PRO; PR:O04310; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; O04310; baseline and differential.
DR Genevisible; O04310; AT.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0005634; C:nucleus; HDA:TAIR.
DR GO; GO:0009506; C:plasmodesma; HDA:TAIR.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProtKB-KW.
DR GO; GO:0005507; F:copper ion binding; HDA:TAIR.
DR CDD; cd09612; Jacalin; 4.
DR Gene3D; 2.100.10.30; -; 4.
DR InterPro; IPR001229; Jacalin-like_lectin_dom.
DR InterPro; IPR033734; Jacalin-like_lectin_dom_plant.
DR InterPro; IPR036404; Jacalin-like_lectin_dom_sf.
DR Pfam; PF01419; Jacalin; 4.
DR SMART; SM00915; Jacalin; 4.
DR SUPFAM; SSF51101; SSF51101; 4.
DR PROSITE; PS51752; JACALIN_LECTIN; 4.
PE 1: Evidence at protein level;
KW Lectin; Reference proteome; Repeat.
FT CHAIN 1..705
FT /note="Jacalin-related lectin 34"
FT /id="PRO_0000430393"
FT DOMAIN 1..127
FT /note="Jacalin-type lectin 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01088"
FT DOMAIN 252..395
FT /note="Jacalin-type lectin 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01088"
FT DOMAIN 406..548
FT /note="Jacalin-type lectin 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01088"
FT DOMAIN 560..702
FT /note="Jacalin-type lectin 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01088"
FT REGION 128..271
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 131..268
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 705 AA; 72474 MW; DC7F51FC0FD39C05 CRC64;
MSWDDGSHAK VKKVQLTFDE IIYSIQVTYD GATALQSQLR GSVGPKSAEF TLAPDEYITA
LSAYGKSLST QEVITALTFT TNKTSYGPYG TKSGFQISAP EATGKQISGF LGTSGNVLNT
IDVHYSPIPT GGTGTGGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGGTG TGTGTGTGGT
GTGTGTGGTG TGTGTGTGTG TGTGTGTGTG TGGTGTGTGT GGTGTGTGTG TGTGTGTGGT
GTGTGTGTGS GAQKLEAQGN STGGTSWDDG SDYDGVTKIY ASYGGEGIQY VKFDYVKGGV
TKQGVLHGKQ QSRQNPREFV INHPDEYLVS VEGWYETVML GIQFKTNLNT YEVSIYPFEP
STDTKFTLQV QDKKIIGFHG FAGNHVNSIG AYFVPKSSTT PVPSTPLKLT AEGGETGAVW
DDGSHDDVKK VYVGQGQDGV AAVKFEYKNG SQVVFGDERG TRTLLGFEEF ELESDEYITS
VEGYYEKNFG VDTVVTTLIF KTSKNKTAGP FGIVSGTKFE FKKEGYKITG FHGRAGEYVN
AIGAYLAPSG TTPLTPATQS QKLEGAGSEA GTLWDDGAFD GVRKVSVGQA QDGIGAVSFV
YDKAGQVVEG KEHGKPTLLG FEEFELDYPS EYITAVDGTY DAIFGNEPIV NMLRFTTNKR
VSIPFGIGAG TAFEFKKDGQ KIVGFHGRAG DLLHKFGVHV APITK
