JAL36_ARATH
ID JAL36_ARATH Reviewed; 460 AA.
AC Q9LIF8; Q6NQJ9;
DT 01-OCT-2014, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 121.
DE RecName: Full=Jacalin-related lectin 36;
GN Name=JAL36; OrderedLocusNames=At3g21380; ORFNames=MHC9.6;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T.,
RA Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K.,
RA Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K.,
RA Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA Hayashizaki Y., Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 6-460.
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=18467340; DOI=10.1093/pcp/pcn075;
RA Nagano A.J., Fukao Y., Fujiwara M., Nishimura M., Hara-Nishimura I.;
RT "Antagonistic jacalin-related lectins regulate the size of ER body-type
RT beta-glucosidase complexes in Arabidopsis thaliana.";
RL Plant Cell Physiol. 49:969-980(2008).
CC -!- SIMILARITY: Belongs to the jacalin lectin family. {ECO:0000255|PROSITE-
CC ProRule:PRU01088, ECO:0000305}.
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DR EMBL; AP001305; BAB03051.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE76503.1; -; Genomic_DNA.
DR EMBL; AK221897; BAD94257.1; -; mRNA.
DR EMBL; AK229853; BAF01682.1; -; mRNA.
DR EMBL; BT010454; AAQ62874.1; -; mRNA.
DR RefSeq; NP_001319607.1; NM_001338529.1.
DR AlphaFoldDB; Q9LIF8; -.
DR SMR; Q9LIF8; -.
DR STRING; 3702.AT3G21380.1; -.
DR iPTMnet; Q9LIF8; -.
DR PaxDb; Q9LIF8; -.
DR PRIDE; Q9LIF8; -.
DR ProMEX; Q9LIF8; -.
DR ProteomicsDB; 232291; -.
DR EnsemblPlants; AT3G21380.1; AT3G21380.1; AT3G21380.
DR GeneID; 821692; -.
DR Gramene; AT3G21380.1; AT3G21380.1; AT3G21380.
DR KEGG; ath:AT3G21380; -.
DR Araport; AT3G21380; -.
DR TAIR; locus:2089443; AT3G21380.
DR HOGENOM; CLU_041730_0_0_1; -.
DR InParanoid; Q9LIF8; -.
DR OMA; FSIHAPK; -.
DR OrthoDB; 596228at2759; -.
DR PhylomeDB; Q9LIF8; -.
DR PRO; PR:Q9LIF8; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LIF8; baseline and differential.
DR Genevisible; Q9LIF8; AT.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProtKB-KW.
DR CDD; cd09612; Jacalin; 3.
DR Gene3D; 2.100.10.30; -; 3.
DR InterPro; IPR001229; Jacalin-like_lectin_dom.
DR InterPro; IPR033734; Jacalin-like_lectin_dom_plant.
DR InterPro; IPR036404; Jacalin-like_lectin_dom_sf.
DR Pfam; PF01419; Jacalin; 3.
DR SMART; SM00915; Jacalin; 3.
DR SUPFAM; SSF51101; SSF51101; 3.
DR PROSITE; PS51752; JACALIN_LECTIN; 3.
PE 2: Evidence at transcript level;
KW Acetylation; Lectin; Reference proteome; Repeat.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250|UniProtKB:Q9FGC5"
FT CHAIN 2..460
FT /note="Jacalin-related lectin 36"
FT /id="PRO_0000430394"
FT DOMAIN 1..131
FT /note="Jacalin-type lectin 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01088"
FT DOMAIN 145..289
FT /note="Jacalin-type lectin 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01088"
FT DOMAIN 313..457
FT /note="Jacalin-type lectin 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01088"
FT REGION 34..57
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 133..162
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 291..334
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 35..49
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 133..151
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 292..307
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 2
FT /note="N-acetylalanine"
FT /evidence="ECO:0000250|UniProtKB:Q9FGC5"
SQ SEQUENCE 460 AA; 49724 MW; 5769468489DB48CA CRC64;
MAAATMSWDD GKHMKVKRVQ ITYEDVINSI EAEYDGDTHN PHHHGTPGKK SDGVSLSPDE
YITDVTGYYK TTGAEDAIAA LAFKTNKTEY GPYGNKTRNQ FSIHAPKDNQ IAGFQGISSN
VLNSIDVHFA PLPSSSSSSS SLSQANKVDA QGGKGGTSWD DGAHDHVRRV YIGQGDSGVT
YVKFEYEKDD KKESREHGKK TLLGAEVFEV DPDDYITSVE VQSDRIFGQD TEVITSLIFK
TSKGKFSPPF GLEGSQKYEL KDKNGGKLVG FHGRVGGELL NALGAYFAPS SGRGTPSATQ
PPGSAQPTGS AGAKKLEAKG GNVGNPWDDG PHEGVRKVYI GQGDSGVSYV KFVYDKDSKE
VPGNDHGKRT LLAPEEFLLE YPNEYITSVE LNYDKIFGTE GEIITMLRFT TNKRTSPPFG
LEGAKSVLLK EDGHKIVGFH GKAGADIIHQ VGVHVKPISK