JGL_ARATH
ID JGL_ARATH Reviewed; 207 AA.
AC Q6S592;
DT 03-MAY-2011, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 120.
DE RecName: Full=Zinc finger protein JAGGED-like;
DE AltName: Full=Zinc finger protein NUBBIN;
GN Name=JGL; Synonyms=NUB; OrderedLocusNames=At1g13400; ORFNames=T6J4.23;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND TISSUE SPECIFICITY.
RC STRAIN=cv. Columbia;
RX PubMed=14973282; DOI=10.1242/dev.00949;
RA Dinneny J.R., Yadegari R., Fischer R.L., Yanofsky M.F., Weigel D.;
RT "The role of JAGGED in shaping lateral organs.";
RL Development 131:1101-1110(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP FUNCTION, TISSUE SPECIFICITY, AND DISRUPTION PHENOTYPE.
RX PubMed=16554365; DOI=10.1242/dev.02335;
RA Dinneny J.R., Weigel D., Yanofsky M.F.;
RT "NUBBIN and JAGGED define stamen and carpel shape in Arabidopsis.";
RL Development 133:1645-1655(2006).
CC -!- FUNCTION: Acts with JAG to promote growth and patterning in stamens and
CC carpels. Promotes the growth of the abaxial and adaxial sides of floral
CC organs. Promotes the growth of the pollen-bearing microsporangia in
CC anthers, the carpel walls of the gynoecium and the establishment of the
CC correct number of cell layers in carpel walls. Promotes leaf blade
CC growth and trichome development. {ECO:0000269|PubMed:16554365}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Expressed in the emerging leaf, stamen and carpel
CC primordia. Not expressed in the apical shoot meristem (SAM).
CC {ECO:0000269|PubMed:14973282, ECO:0000269|PubMed:16554365}.
CC -!- DISRUPTION PHENOTYPE: No visible phenotype under normal growth
CC condition. {ECO:0000269|PubMed:16554365}.
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DR EMBL; AY465923; AAR30035.1; -; mRNA.
DR EMBL; AC011810; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002684; AEE29012.1; -; Genomic_DNA.
DR RefSeq; NP_172797.2; NM_101210.3.
DR AlphaFoldDB; Q6S592; -.
DR SMR; Q6S592; -.
DR BioGRID; 23140; 3.
DR IntAct; Q6S592; 3.
DR STRING; 3702.AT1G13400.1; -.
DR PaxDb; Q6S592; -.
DR PRIDE; Q6S592; -.
DR ProteomicsDB; 238986; -.
DR EnsemblPlants; AT1G13400.1; AT1G13400.1; AT1G13400.
DR GeneID; 837900; -.
DR Gramene; AT1G13400.1; AT1G13400.1; AT1G13400.
DR KEGG; ath:AT1G13400; -.
DR Araport; AT1G13400; -.
DR TAIR; locus:2009952; AT1G13400.
DR eggNOG; ENOG502QUI4; Eukaryota.
DR HOGENOM; CLU_062933_0_0_1; -.
DR InParanoid; Q6S592; -.
DR OMA; GFREKHI; -.
DR OrthoDB; 1361439at2759; -.
DR PhylomeDB; Q6S592; -.
DR PRO; PR:Q6S592; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q6S592; baseline and differential.
DR Genevisible; Q6S592; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0048653; P:anther development; IGI:TAIR.
DR GO; GO:0048440; P:carpel development; IGI:TAIR.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR GO; GO:0048443; P:stamen development; IGI:TAIR.
DR InterPro; IPR045320; JAGGED/KNUCKLES-like.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR45730; PTHR45730; 1.
DR SUPFAM; SSF57667; SSF57667; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; Differentiation; Metal-binding; Nucleus;
KW Reference proteome; Zinc; Zinc-finger.
FT CHAIN 1..207
FT /note="Zinc finger protein JAGGED-like"
FT /id="PRO_0000407989"
FT ZN_FING 50..72
FT /note="C2H2-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00042"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 207 AA; 23150 MW; 82BA58D675E0ED9C CRC64;
MRADENNTLD LNNLPDDPSR DIFPFFEEGF SSSSSSGGFR EKQTKDGKEY ECRFCSLKFF
KSQALGGHMN RHRQERETES LNKARELVLR NDSFPPHQGP PSFSYHQGDV HIGDLTQFKP
MMYPPRHFSL PGSSSILQLQ PPYLYPPLSS PFPQHNTNIG NNGTRHQTLT NSVCGGRALP
DSSYTFIGAP VANGSRVAPH LPPHHGL
