KATAM_ORYSJ
ID KATAM_ORYSJ Reviewed; 588 AA.
AC Q8H038;
DT 25-JUL-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 25-MAY-2022, entry version 84.
DE RecName: Full=Xyloglucan galactosyltransferase KATAMARI1 homolog;
DE EC=2.4.1.-;
GN OrderedLocusNames=Os03g0144800, LOC_Os03g05110; ORFNames=OJ1172F09.5;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: Involved in the attachment of the Gal residue on the third
CC xylosyl unit within the XXXG core structure of xyloglucan, the
CC principal glycan that interlaces the cellulose microfibrils in plant
CC cell wall. Interacts with actin and is required for the proper
CC endomembrane organization and for the cell elongation (By similarity).
CC {ECO:0000250}.
CC -!- PATHWAY: Protein modification; protein glycosylation.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus, Golgi stack membrane
CC {ECO:0000250}; Single-pass type II membrane protein {ECO:0000250}.
CC -!- DOMAIN: The cytoplasmic N-terminal domain interacts with actin, while
CC the lumenal C-terminal domain contributes to the activity of xyloglucan
CC galactosyltransferase. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 47 family.
CC {ECO:0000305}.
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DR EMBL; AC119796; AAO17350.1; -; Genomic_DNA.
DR EMBL; AP014959; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AK103041; -; NOT_ANNOTATED_CDS; mRNA.
DR AlphaFoldDB; Q8H038; -.
DR STRING; 4530.OS03T0144800-01; -.
DR CAZy; GT47; Glycosyltransferase Family 47.
DR PaxDb; Q8H038; -.
DR PRIDE; Q8H038; -.
DR eggNOG; KOG1021; Eukaryota.
DR InParanoid; Q8H038; -.
DR PlantReactome; R-OSA-5655101; Xyloglucan biosynthesis.
DR UniPathway; UPA00378; -.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR Genevisible; Q8H038; OS.
DR GO; GO:0032580; C:Golgi cisterna membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016757; F:glycosyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0006486; P:protein glycosylation; IEA:UniProtKB-UniPathway.
DR InterPro; IPR004263; Exostosin.
DR InterPro; IPR040911; Exostosin_GT47.
DR PANTHER; PTHR11062; PTHR11062; 1.
DR Pfam; PF03016; Exostosin; 1.
PE 2: Evidence at transcript level;
KW Glycosyltransferase; Golgi apparatus; Membrane; Reference proteome;
KW Signal-anchor; Transferase; Transmembrane; Transmembrane helix.
FT CHAIN 1..588
FT /note="Xyloglucan galactosyltransferase KATAMARI1 homolog"
FT /id="PRO_0000247499"
FT TOPO_DOM 1..14
FT /note="Cytoplasmic"
FT /evidence="ECO:0000250"
FT TRANSMEM 15..35
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000250"
FT TOPO_DOM 36..588
FT /note="Lumenal"
FT /evidence="ECO:0000250"
FT REGION 549..588
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 565..588
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 475
FT /note="K -> R (in Ref. 4; AK103041)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 588 AA; 66715 MW; 6DD1A94DD0761867 CRC64;
MEKVGGKPPQ SRLCFLATLC AMFWVLIFYF HFFVIANEPG SAGADTAAGA AASIARAELP
LPEPERVSDP AVPLPPPALV SEPPPTTATV AKVEDEEKPT AVAHQEAAPR DYAFQRALKT
AENKSDPCGG RYIYVHELPP RFNDDMLREC ERLSLWTNMC KFMSNEGLGP PLGNEEGVFS
NTGWYATNQF MVDVIFRNRM KQYECLTKDS SIAAAVFVPF YAGFDVARYL WGHNISTRDA
ASLDLIDWLR KRPEWNVMGG RDHFLVGGRI AWDFRRLTDE ESDWGNKLLF MPAAKNMSML
VVESSPWNAN DFAIPYPTYF HPAKDADVLL WQDRMRSLER PWLFSFAGAP RPDDPKSIRS
QLIDQCRTSS VCKLLECDLG ESKCHSPSAI MNMFQNSLFC LQPQGDSYTR RSAFDSMLAG
CIPVFFHPGS AYVQYTWHLP KNYTRYSVFI PEDGVRKGNV SIEDRLKSIH PDMVKKMREE
VISLIPRVIY ADPRSKLETL KDAFDVSVEA IINKVTQLRR DIIEDHEDKD FVEENSWKYD
LLEEGQRTIG PHEWDPFFSK PKDKGGDSTN PSTNAAKNSW KNEQRGQN