KCJ13_RAT
ID KCJ13_RAT Reviewed; 360 AA.
AC O70617;
DT 27-APR-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1998, sequence version 1.
DT 03-AUG-2022, entry version 141.
DE RecName: Full=Inward rectifier potassium channel 13;
DE AltName: Full=Inward rectifier K(+) channel Kir7.1;
DE AltName: Full=Potassium channel, inwardly rectifying subfamily J member 13;
GN Name=Kcnj13;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Brain;
RA Doering F., Derst C., Wischmeyer E., Karschin C., Daut J., Karschin A.;
RT "Unique epithelial Kir7.1 subunit defines a new subfamily of inwardly
RT rectifying potassium channels.";
RL Submitted (MAY-1998) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Kidney;
RA Hirose S., Suzuki Y., Nakamura N.;
RL Submitted (MAY-1998) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC TISSUE=Liver;
RX PubMed=10871613; DOI=10.1074/jbc.m003734200;
RA Nakamura N., Suzuki Y., Ikeda Y., Notoya M., Hirose S.;
RT "Complex structure and regulation of expression of the rat gene for inward
RT rectifier potassium channel Kir7.1.";
RL J. Biol. Chem. 275:28276-28284(2000).
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC TISSUE=Liver;
RX PubMed=11042260; DOI=10.1016/s0014-5793(00)02092-5;
RA Doering F., Karschin A.;
RT "Genomic structure and promoter analysis of the rat Kir7.1 potassium
RT channel gene (Kcnj13).";
RL FEBS Lett. 483:93-98(2000).
CC -!- FUNCTION: Inward rectifier potassium channels are characterized by a
CC greater tendency to allow potassium to flow into the cell rather than
CC out of it. Their voltage dependence is regulated by the concentration
CC of extracellular potassium; as external potassium is raised, the
CC voltage range of the channel opening shifts to more positive voltages.
CC The inward rectification is mainly due to the blockage of outward
CC current by internal magnesium. KCNJ13 has a very low single channel
CC conductance, low sensitivity to block by external barium and cesium,
CC and no dependence of its inward rectification properties on the
CC internal blocking particle magnesium.
CC -!- SUBCELLULAR LOCATION: Membrane; Multi-pass membrane protein.
CC -!- PTM: Phosphorylation at Ser-201 by PKC strongly inhibits ionic
CC currents, while phosphorylation at Ser-287 by PKA increases them.
CC {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the inward rectifier-type potassium channel (TC
CC 1.A.2.1) family. KCNJ13 subfamily. {ECO:0000305}.
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DR EMBL; AJ006129; CAA06879.1; -; mRNA.
DR EMBL; AB013890; BAA28272.1; -; mRNA.
DR EMBL; AB034241; BAA97255.1; -; Genomic_DNA.
DR EMBL; AJ292748; CAC17469.1; -; Genomic_DNA.
DR RefSeq; NP_446060.1; NM_053608.2.
DR RefSeq; XP_008765523.1; XM_008767301.2.
DR AlphaFoldDB; O70617; -.
DR SMR; O70617; -.
DR STRING; 10116.ENSRNOP00000021507; -.
DR PaxDb; O70617; -.
DR Ensembl; ENSRNOT00000021507; ENSRNOP00000021507; ENSRNOG00000016057.
DR GeneID; 94341; -.
DR KEGG; rno:94341; -.
DR UCSC; RGD:621661; rat.
DR CTD; 3769; -.
DR RGD; 621661; Kcnj13.
DR eggNOG; KOG3827; Eukaryota.
DR GeneTree; ENSGT00990000203615; -.
DR HOGENOM; CLU_022738_3_3_1; -.
DR InParanoid; O70617; -.
DR OMA; QGQTCLM; -.
DR OrthoDB; 956263at2759; -.
DR PhylomeDB; O70617; -.
DR TreeFam; TF313676; -.
DR PRO; PR:O70617; -.
DR Proteomes; UP000002494; Chromosome 9.
DR Bgee; ENSRNOG00000016057; Expressed in duodenum and 14 other tissues.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR GO; GO:0005242; F:inward rectifier potassium channel activity; IBA:GO_Central.
DR GO; GO:1990573; P:potassium ion import across plasma membrane; IBA:GO_Central.
DR GO; GO:0034765; P:regulation of ion transmembrane transport; IBA:GO_Central.
DR Gene3D; 2.60.40.1400; -; 1.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR041647; IRK_C.
DR InterPro; IPR016449; K_chnl_inward-rec_Kir.
DR InterPro; IPR013518; K_chnl_inward-rec_Kir_cyto.
DR InterPro; IPR008062; KCNJ13.
DR InterPro; IPR040445; Kir_TM.
DR PANTHER; PTHR11767; PTHR11767; 1.
DR PANTHER; PTHR11767:SF3; PTHR11767:SF3; 1.
DR Pfam; PF01007; IRK; 1.
DR Pfam; PF17655; IRK_C; 1.
DR PIRSF; PIRSF005465; GIRK_kir; 1.
DR PRINTS; PR01679; KIR7CHANNEL.
DR PRINTS; PR01320; KIRCHANNEL.
DR SUPFAM; SSF81296; SSF81296; 1.
PE 2: Evidence at transcript level;
KW Ion channel; Ion transport; Membrane; Phosphoprotein; Potassium;
KW Potassium transport; Reference proteome; Transmembrane;
KW Transmembrane helix; Transport; Voltage-gated channel.
FT CHAIN 1..360
FT /note="Inward rectifier potassium channel 13"
FT /id="PRO_0000154967"
FT TOPO_DOM 1..53
FT /note="Cytoplasmic"
FT /evidence="ECO:0000250"
FT TRANSMEM 54..78
FT /note="Helical; Name=M1"
FT /evidence="ECO:0000250"
FT TOPO_DOM 79..105
FT /note="Extracellular"
FT /evidence="ECO:0000250"
FT INTRAMEM 106..117
FT /note="Helical; Pore-forming; Name=H5"
FT /evidence="ECO:0000250"
FT INTRAMEM 118..124
FT /note="Pore-forming"
FT /evidence="ECO:0000250"
FT TOPO_DOM 125..133
FT /note="Extracellular"
FT /evidence="ECO:0000250"
FT TRANSMEM 134..155
FT /note="Helical; Name=M2"
FT /evidence="ECO:0000250"
FT TOPO_DOM 156..360
FT /note="Cytoplasmic"
FT /evidence="ECO:0000250"
FT MOTIF 119..124
FT /note="Selectivity filter"
FT /evidence="ECO:0000250"
FT SITE 149
FT /note="Role in the control of polyamine-mediated channel
FT gating and in the blocking by intracellular magnesium"
FT /evidence="ECO:0000250"
FT MOD_RES 201
FT /note="Phosphoserine; by PKC"
FT /evidence="ECO:0000250|UniProtKB:O60928"
FT MOD_RES 287
FT /note="Phosphoserine; by PKA"
FT /evidence="ECO:0000250|UniProtKB:O60928"
SQ SEQUENCE 360 AA; 40637 MW; B3D2F6CB8F99FD16 CRC64;
MDSRNCKVNA PLLSQRYRRM VTKDGHSTLQ MDGAQRGLVY LRDAWGILMD MRWRWMMLVF
SASFVVHWLV FAVLWYAVAE MNGDLEIDHD VPPENHTICV KHITSFTAAF SFSLETQLTI
GYGTMFPSGD CPSAIALLAI QMLLGLMLEA FITGAFVAKI ARPKNRAFSI RFTDLAVVAH
KDGKPNLIFQ VANTRPSPLT SVRVSAVLYQ ERENGELYQT SVDFHLDGIS SEECPFFIFP
LTYYHTITPS SPLATLLQHE TPSHFELVVF LSAMQEGTGE ICQRRTSYLP SEIMLHHRFA
ALMTRGSKGE YQVKMENFDK TVPEHPTPVV SKSPHRTDLD IHINGQSIDN FQIAETGLTE