KDGD_CERSK
ID KDGD_CERSK Reviewed; 301 AA.
AC B9KW45;
DT 28-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 24-MAR-2009, sequence version 1.
DT 25-MAY-2022, entry version 61.
DE RecName: Full=Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000255|HAMAP-Rule:MF_00694};
DE EC=4.2.1.41 {ECO:0000255|HAMAP-Rule:MF_00694};
DE AltName: Full=5-keto-4-deoxy-glucarate dehydratase {ECO:0000255|HAMAP-Rule:MF_00694};
DE Short=KDGDH {ECO:0000255|HAMAP-Rule:MF_00694};
GN OrderedLocusNames=RSKD131_3189;
OS Cereibacter sphaeroides (strain KD131 / KCTC 12085) (Rhodobacter
OS sphaeroides).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC Rhodobacteraceae; Cereibacter.
OX NCBI_TaxID=557760;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KD131 / KCTC 12085;
RX PubMed=19028901; DOI=10.1128/jb.01565-08;
RA Lim S.-K., Kim S.J., Cha S.H., Oh Y.-K., Rhee H.-J., Kim M.-S., Lee J.K.;
RT "Complete genome sequence of Rhodobacter sphaeroides KD131.";
RL J. Bacteriol. 191:1118-1119(2009).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=5-dehydro-4-deoxy-D-glucarate + H(+) = 2,5-dioxopentanoate +
CC CO2 + H2O; Xref=Rhea:RHEA:24608, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:16526, ChEBI:CHEBI:42819,
CC ChEBI:CHEBI:58136; EC=4.2.1.41; Evidence={ECO:0000255|HAMAP-
CC Rule:MF_00694};
CC -!- PATHWAY: Carbohydrate acid metabolism; D-glucarate degradation; 2,5-
CC dioxopentanoate from D-glucarate: step 2/2. {ECO:0000255|HAMAP-
CC Rule:MF_00694}.
CC -!- SIMILARITY: Belongs to the DapA family. {ECO:0000255|HAMAP-
CC Rule:MF_00694}.
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DR EMBL; CP001151; ACM03049.1; -; Genomic_DNA.
DR RefSeq; WP_012640837.1; NC_011958.1.
DR AlphaFoldDB; B9KW45; -.
DR SMR; B9KW45; -.
DR EnsemblBacteria; ACM03049; ACM03049; RSKD131_3189.
DR GeneID; 67448539; -.
DR KEGG; rsk:RSKD131_3189; -.
DR HOGENOM; CLU_049343_5_2_5; -.
DR OMA; MVYNRDN; -.
DR UniPathway; UPA00564; UER00628.
DR Proteomes; UP000001597; Chromosome 2.
DR GO; GO:0047448; F:5-dehydro-4-deoxyglucarate dehydratase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0042838; P:D-glucarate catabolic process; IEA:UniProtKB-UniPathway.
DR CDD; cd00951; KDGDH; 1.
DR Gene3D; 3.20.20.70; -; 1.
DR HAMAP; MF_00694; KDGDH; 1.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR002220; DapA-like.
DR InterPro; IPR017655; Dehydro-deoxyglucarate_dehyd.
DR PANTHER; PTHR12128; PTHR12128; 1.
DR Pfam; PF00701; DHDPS; 1.
DR PIRSF; PIRSF001365; DHDPS; 1.
DR SMART; SM01130; DHDPS; 1.
DR TIGRFAMs; TIGR03249; KdgD; 1.
PE 3: Inferred from homology;
KW Lyase.
FT CHAIN 1..301
FT /note="Probable 5-dehydro-4-deoxyglucarate dehydratase"
FT /id="PRO_1000147909"
SQ SEQUENCE 301 AA; 32032 MW; 1F6687A66A636911 CRC64;
MDPQQIKAAL GSGLLSFPVT PFDAENRFAA APYQKHVEWL SGFDAPVLFA AGGTGEFFSL
TPDEIPAIVR AAKESAGKTA IVSGCGYGTE IARGIARSVE AAGGDGILLL PHYLIDAPQE
GLYAHVRAVC QATGMGVMVY NRDNAVLQAD TLARLCDDCP NLVGFKDGTG DIGLVRQITA
KMGDRLTYLG GMPTAELFAE AYLGASFTTY SSAVFNFVPA LANKFYAALR AGDRATCESI
LNSFFYPFME LRSRRKGYAV AAVKAGVRLV GFDAGPVRAP LSDLTGEEEK ILEALIDAHR
E