KDGD_PSEPW
ID KDGD_PSEPW Reviewed; 303 AA.
AC B1J9C7;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 29-APR-2008, sequence version 1.
DT 25-MAY-2022, entry version 75.
DE RecName: Full=Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000255|HAMAP-Rule:MF_00694};
DE EC=4.2.1.41 {ECO:0000255|HAMAP-Rule:MF_00694};
DE AltName: Full=5-keto-4-deoxy-glucarate dehydratase {ECO:0000255|HAMAP-Rule:MF_00694};
DE Short=KDGDH {ECO:0000255|HAMAP-Rule:MF_00694};
GN OrderedLocusNames=PputW619_2814;
OS Pseudomonas putida (strain W619).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=390235;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=W619;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S.,
RA Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L.,
RA Kyrpides N., Kim E., Taghavi S., Vangronsveld D., van der Lelie D.,
RA Richardson P.;
RT "Complete sequence of Pseudomonas putida W619.";
RL Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=5-dehydro-4-deoxy-D-glucarate + H(+) = 2,5-dioxopentanoate +
CC CO2 + H2O; Xref=Rhea:RHEA:24608, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:16526, ChEBI:CHEBI:42819,
CC ChEBI:CHEBI:58136; EC=4.2.1.41; Evidence={ECO:0000255|HAMAP-
CC Rule:MF_00694};
CC -!- PATHWAY: Carbohydrate acid metabolism; D-glucarate degradation; 2,5-
CC dioxopentanoate from D-glucarate: step 2/2. {ECO:0000255|HAMAP-
CC Rule:MF_00694}.
CC -!- SIMILARITY: Belongs to the DapA family. {ECO:0000255|HAMAP-
CC Rule:MF_00694}.
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DR EMBL; CP000949; ACA73306.1; -; Genomic_DNA.
DR RefSeq; WP_012314664.1; NC_010501.1.
DR AlphaFoldDB; B1J9C7; -.
DR SMR; B1J9C7; -.
DR STRING; 390235.PputW619_2814; -.
DR EnsemblBacteria; ACA73306; ACA73306; PputW619_2814.
DR KEGG; ppw:PputW619_2814; -.
DR eggNOG; COG0329; Bacteria.
DR HOGENOM; CLU_049343_5_2_6; -.
DR OMA; EFHALTP; -.
DR OrthoDB; 1438588at2; -.
DR UniPathway; UPA00564; UER00628.
DR GO; GO:0047448; F:5-dehydro-4-deoxyglucarate dehydratase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0042838; P:D-glucarate catabolic process; IEA:UniProtKB-UniPathway.
DR CDD; cd00951; KDGDH; 1.
DR Gene3D; 3.20.20.70; -; 1.
DR HAMAP; MF_00694; KDGDH; 1.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR002220; DapA-like.
DR InterPro; IPR017655; Dehydro-deoxyglucarate_dehyd.
DR PANTHER; PTHR12128; PTHR12128; 1.
DR Pfam; PF00701; DHDPS; 1.
DR PIRSF; PIRSF001365; DHDPS; 1.
DR SMART; SM01130; DHDPS; 1.
DR TIGRFAMs; TIGR03249; KdgD; 1.
PE 3: Inferred from homology;
KW Lyase.
FT CHAIN 1..303
FT /note="Probable 5-dehydro-4-deoxyglucarate dehydratase"
FT /id="PRO_1000132272"
SQ SEQUENCE 303 AA; 32700 MW; 160D54F3E1A2C06C CRC64;
MNPQELKSIL SHGLLSFPVT DFNAQGDFNQ AGYIKRLEWL APYGASALFA AGGTGEFFSL
AASEYSQVIK TAVDTCAKSV PILAGVGGST RQAIEYAQEA ERLGAKGLLL LPHYLTEASQ
DGVAAHVEAV CKSVNIGVVV YNRNVCRLNA DLLEKLAERC PNLIGYKDGL GDIELMVSIR
RRLGDRFSYL GGLPTAEVYA AAYKALGVPV YSSAVFNFIP KTAMDFYHAI ARDDHATVGK
LIDDFFLPYL DIRNRKAGYA VSIVKAGAKI AGYDAGPVRT PLTDLTAEEY EMLAALMDKM
GPQ