KDGD_RALPJ
ID KDGD_RALPJ Reviewed; 312 AA.
AC B2UIZ4;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-2008, sequence version 1.
DT 25-MAY-2022, entry version 81.
DE RecName: Full=Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000255|HAMAP-Rule:MF_00694};
DE EC=4.2.1.41 {ECO:0000255|HAMAP-Rule:MF_00694};
DE AltName: Full=5-keto-4-deoxy-glucarate dehydratase {ECO:0000255|HAMAP-Rule:MF_00694};
DE Short=KDGDH {ECO:0000255|HAMAP-Rule:MF_00694};
GN OrderedLocusNames=Rpic_4452;
OS Ralstonia pickettii (strain 12J).
OC Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Ralstonia.
OX NCBI_TaxID=402626;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=12J;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Meincke L., Brettin T., Detter J.C.,
RA Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L.,
RA Kyrpides N., Mikhailova N., Marsh T., Richardson P.;
RT "Complete sequence of chromosome 2 of Ralstonia pickettii 12J.";
RL Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=5-dehydro-4-deoxy-D-glucarate + H(+) = 2,5-dioxopentanoate +
CC CO2 + H2O; Xref=Rhea:RHEA:24608, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:16526, ChEBI:CHEBI:42819,
CC ChEBI:CHEBI:58136; EC=4.2.1.41; Evidence={ECO:0000255|HAMAP-
CC Rule:MF_00694};
CC -!- PATHWAY: Carbohydrate acid metabolism; D-glucarate degradation; 2,5-
CC dioxopentanoate from D-glucarate: step 2/2. {ECO:0000255|HAMAP-
CC Rule:MF_00694}.
CC -!- SIMILARITY: Belongs to the DapA family. {ECO:0000255|HAMAP-
CC Rule:MF_00694}.
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DR EMBL; CP001069; ACD29545.1; -; Genomic_DNA.
DR RefSeq; WP_004633970.1; NC_010678.1.
DR AlphaFoldDB; B2UIZ4; -.
DR SMR; B2UIZ4; -.
DR STRING; 402626.Rpic_4452; -.
DR EnsemblBacteria; ACD29545; ACD29545; Rpic_4452.
DR KEGG; rpi:Rpic_4452; -.
DR eggNOG; COG0329; Bacteria.
DR HOGENOM; CLU_049343_5_2_4; -.
DR OMA; EFHALTP; -.
DR OrthoDB; 1438588at2; -.
DR UniPathway; UPA00564; UER00628.
DR GO; GO:0047448; F:5-dehydro-4-deoxyglucarate dehydratase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0042838; P:D-glucarate catabolic process; IEA:UniProtKB-UniPathway.
DR CDD; cd00951; KDGDH; 1.
DR Gene3D; 3.20.20.70; -; 1.
DR HAMAP; MF_00694; KDGDH; 1.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR002220; DapA-like.
DR InterPro; IPR017655; Dehydro-deoxyglucarate_dehyd.
DR PANTHER; PTHR12128; PTHR12128; 1.
DR Pfam; PF00701; DHDPS; 1.
DR PIRSF; PIRSF001365; DHDPS; 1.
DR SMART; SM01130; DHDPS; 1.
DR TIGRFAMs; TIGR03249; KdgD; 1.
PE 3: Inferred from homology;
KW Lyase.
FT CHAIN 1..312
FT /note="Probable 5-dehydro-4-deoxyglucarate dehydratase"
FT /id="PRO_1000132273"
SQ SEQUENCE 312 AA; 33638 MW; 1515644399797B1E CRC64;
MSRYSPKEFA QQIGSGLLSF PITHFKASDL SFDEAAYRAN LSWLFSHEAA GLFAAGGTGE
FFSLTAAETD RVVRAAVAET AGKIPVIAPA GRGTAESIEY CKAAEAAGAD GILLLPPYLT
EASADGVAAH VEQVCKSTKL GVIVYNRANQ VLDENHLERL ADRCPNLVGF KDGVGDLELM
TRIYARLGDR FTYVGGLPTA ETFALPYLTM GVTTYSSAIF NFVPKFALEF YAAVRAFDNA
KVYKMLNEFV LPYIQLRNRK RGYAVSIVKA GMKVIGRDAG PVRAPLTDLT DAEIAELSAL
VSRVAEVEKL AA