KDGF_DICD3
ID KDGF_DICD3 Reviewed; 110 AA.
AC Q05527; E0SDC2;
DT 01-OCT-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1994, sequence version 1.
DT 03-AUG-2022, entry version 83.
DE RecName: Full=Pectin degradation protein KdgF;
GN Name=kdgF; OrderedLocusNames=Dda3937_00019;
OS Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Pectobacteriaceae; Dickeya.
OX NCBI_TaxID=198628;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=3937;
RX PubMed=1766386; DOI=10.1111/j.1365-2958.1991.tb02149.x;
RA Condemine G., Robert-Baudouy J.;
RT "Analysis of an Erwinia chrysanthemi gene cluster involved in pectin
RT degradation.";
RL Mol. Microbiol. 5:2191-2202(1991).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=3937;
RX PubMed=21217001; DOI=10.1128/jb.01513-10;
RA Glasner J.D., Yang C.H., Reverchon S., Hugouvieux-Cotte-Pattat N.,
RA Condemine G., Bohin J.P., Van Gijsegem F., Yang S., Franza T., Expert D.,
RA Plunkett G. III, San Francisco M.J., Charkowski A.O., Py B., Bell K.,
RA Rauscher L., Rodriguez-Palenzuela P., Toussaint A., Holeva M.C., He S.Y.,
RA Douet V., Boccara M., Blanco C., Toth I., Anderson B.D., Biehl B.S.,
RA Mau B., Flynn S.M., Barras F., Lindeberg M., Birch P.R., Tsuyumu S.,
RA Shi X., Hibbing M., Yap M.N., Carpentier M., Dassa E., Umehara M.,
RA Kim J.F., Rusch M., Soni P., Mayhew G.F., Fouts D.E., Gill S.R.,
RA Blattner F.R., Keen N.T., Perna N.T.;
RT "Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937.";
RL J. Bacteriol. 193:2076-2077(2011).
CC -!- FUNCTION: May have a role in pathogenicity.
CC -!- PATHWAY: Glycan metabolism; pectin degradation.
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DR EMBL; X62073; CAA43987.1; -; Genomic_DNA.
DR EMBL; CP002038; ADM98614.1; -; Genomic_DNA.
DR PIR; S17709; S17709.
DR RefSeq; WP_013318064.1; NC_014500.1.
DR AlphaFoldDB; Q05527; -.
DR SMR; Q05527; -.
DR STRING; 198628.Dda3937_00019; -.
DR EnsemblBacteria; ADM98614; ADM98614; Dda3937_00019.
DR GeneID; 9733849; -.
DR KEGG; ddd:Dda3937_00019; -.
DR PATRIC; fig|198628.6.peg.2391; -.
DR eggNOG; COG1917; Bacteria.
DR HOGENOM; CLU_134269_1_1_6; -.
DR OMA; THSHPNE; -.
DR OrthoDB; 1928636at2; -.
DR BioCyc; DDAD198628:DDA3937_RS11325-MON; -.
DR UniPathway; UPA00545; -.
DR Proteomes; UP000006859; Chromosome.
DR GO; GO:0045490; P:pectin catabolic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 2.60.120.10; -; 1.
DR InterPro; IPR013096; Cupin_2.
DR InterPro; IPR025499; KdgF.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR Pfam; PF07883; Cupin_2; 1.
DR PIRSF; PIRSF029883; KdgF; 1.
DR SUPFAM; SSF51182; SSF51182; 1.
PE 4: Predicted;
KW Reference proteome.
FT CHAIN 1..110
FT /note="Pectin degradation protein KdgF"
FT /id="PRO_0000084298"
SQ SEQUENCE 110 AA; 12439 MW; EFC14F71032A03CE CRC64;
MRRYFIDDET PWEELGDGIK RKIITWSDDL MMVCVHFAKG AIGTPHKHDI HDQIAYVAAG
SFEVVIEGEK RILKTGDAYM AVKNEMHGVV SLEEGSVLID TFSPKRADFL