ARAA_MYCSM
ID ARAA_MYCSM Reviewed; 501 AA.
AC Q9RHG2;
DT 23-JAN-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 73.
DE RecName: Full=L-arabinose isomerase {ECO:0000255|HAMAP-Rule:MF_00519};
DE EC=5.3.1.4 {ECO:0000255|HAMAP-Rule:MF_00519};
GN Name=araA {ECO:0000255|HAMAP-Rule:MF_00519};
OS Mycolicibacterium smegmatis (Mycobacterium smegmatis).
OC Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC Mycolicibacterium.
OX NCBI_TaxID=1772;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=SMDU;
RA Soda A., Takata G., Izumori K.;
RL Submitted (FEB-2000) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Catalyzes the conversion of L-arabinose to L-ribulose.
CC {ECO:0000255|HAMAP-Rule:MF_00519}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=beta-L-arabinopyranose = L-ribulose; Xref=Rhea:RHEA:14821,
CC ChEBI:CHEBI:16880, ChEBI:CHEBI:40886; EC=5.3.1.4;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00519};
CC -!- COFACTOR:
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00519};
CC Note=Binds 1 Mn(2+) ion per subunit. {ECO:0000255|HAMAP-Rule:MF_00519};
CC -!- PATHWAY: Carbohydrate degradation; L-arabinose degradation via L-
CC ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route):
CC step 1/3. {ECO:0000255|HAMAP-Rule:MF_00519}.
CC -!- SIMILARITY: Belongs to the arabinose isomerase family.
CC {ECO:0000255|HAMAP-Rule:MF_00519}.
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DR EMBL; AB036736; BAA89428.1; -; Genomic_DNA.
DR EMBL; AB038527; BAA92526.1; -; Genomic_DNA.
DR RefSeq; WP_011727846.1; NZ_UGQO01000001.1.
DR AlphaFoldDB; Q9RHG2; -.
DR SMR; Q9RHG2; -.
DR GeneID; 66733163; -.
DR OMA; HMLEICP; -.
DR UniPathway; UPA00145; UER00565.
DR GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR GO; GO:0008733; F:L-arabinose isomerase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0030145; F:manganese ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0019569; P:L-arabinose catabolic process to xylulose 5-phosphate; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.10940; -; 1.
DR HAMAP; MF_00519; Arabinose_Isome; 1.
DR InterPro; IPR024664; Ara_Isoase_C.
DR InterPro; IPR038583; AraA_N_sf.
DR InterPro; IPR004216; Fuc/Ara_isomerase_C.
DR InterPro; IPR009015; Fucose_isomerase_N/cen_sf.
DR InterPro; IPR003762; Lara_isomerase.
DR PANTHER; PTHR38464; PTHR38464; 1.
DR Pfam; PF11762; Arabinose_Iso_C; 1.
DR Pfam; PF02610; Arabinose_Isome; 1.
DR PIRSF; PIRSF001478; L-ara_isomerase; 1.
DR SUPFAM; SSF50443; SSF50443; 1.
DR SUPFAM; SSF53743; SSF53743; 1.
PE 3: Inferred from homology;
KW Arabinose catabolism; Carbohydrate metabolism; Isomerase; Manganese;
KW Metal-binding.
FT CHAIN 1..501
FT /note="L-arabinose isomerase"
FT /id="PRO_0000198390"
FT BINDING 306
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00519"
FT BINDING 333
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00519"
FT BINDING 350
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00519"
FT BINDING 449
FT /ligand="Mn(2+)"
FT /ligand_id="ChEBI:CHEBI:29035"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00519"
SQ SEQUENCE 501 AA; 54955 MW; FD2CFFE85A2ED960 CRC64;
MAEHFTDEEI WFVTGSQSLY GQEILDQVAE QSRALAERLD ASADLPVAVR WKPVVTTSEA
ILDVLRDASS SPQCVGVITW MHTFSPAKMW IRGLSALQKP MLHLHTQFGV EIPWDTIDMD
FMNLNQAAHG DREFGYIQTR LSVPRTTVAG HVGDPRTTAR IGSWMRAALG AAELRSLRIA
RFGDNMRDVA VTEGDKVEAE SHFGVSVNTY SVNDLAKAVY DVSDPEIDKL VQEYEDTYAV
AEELRRGGER HASLREGARI ELGLRHFLAD GFGAFTTNFE DLGDLRQLPG LAVQRLMADG
FGFGAEGDWK TSAMVRTVKT MGVGLPGGTS FMEDYTYDLT PGSERILGAH MLEVCPSIAG
QTPSLEVHPL GIGNREDPVR LRFTAAPGSG VVLGICDMGS RFRLVANHVT VVEPSAPLPN
LPVACAVWEP EPSWSTSTEA WLMAGGPHHT VLTTAVSPTT LDDFATITGT ELLQIDQHTT
PREFQREMRW NAVYHHIAAG L