KHD1B_MOUSE
ID KHD1B_MOUSE Reviewed; 126 AA.
AC P0C7A0;
DT 08-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 08-APR-2008, sequence version 1.
DT 03-AUG-2022, entry version 70.
DE RecName: Full=KH homology domain-containing protein 1B;
GN Name=Khdc1b;
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
OX NCBI_TaxID=10090;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RX PubMed=16141072; DOI=10.1126/science.1112014;
RA Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT "The transcriptional landscape of the mammalian genome.";
RL Science 309:1559-1563(2005).
CC -!- SIMILARITY: Belongs to the KHDC1 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AK139842; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; AK139842; -; NOT_ANNOTATED_CDS; mRNA.
DR CCDS; CCDS48229.1; -.
DR RefSeq; NP_001106658.1; NM_001113187.1.
DR AlphaFoldDB; P0C7A0; -.
DR STRING; 10090.ENSMUSP00000120275; -.
DR PaxDb; P0C7A0; -.
DR PRIDE; P0C7A0; -.
DR Ensembl; ENSMUST00000147615; ENSMUSP00000120275; ENSMUSG00000085079.
DR GeneID; 98582; -.
DR KEGG; mmu:98582; -.
DR UCSC; uc007alp.2; mouse.
DR CTD; 98582; -.
DR MGI; MGI:2138477; Khdc1b.
DR VEuPathDB; HostDB:ENSMUSG00000085079; -.
DR eggNOG; ENOG502TCCK; Eukaryota.
DR GeneTree; ENSGT00940000154353; -.
DR HOGENOM; CLU_102222_1_0_1; -.
DR InParanoid; P0C7A0; -.
DR OMA; IQLEPWF; -.
DR OrthoDB; 1594877at2759; -.
DR PhylomeDB; P0C7A0; -.
DR TreeFam; TF337964; -.
DR BioGRID-ORCS; 98582; 0 hits in 71 CRISPR screens.
DR ChiTaRS; Khdc1b; mouse.
DR PRO; PR:P0C7A0; -.
DR Proteomes; UP000000589; Chromosome 1.
DR RNAct; P0C7A0; protein.
DR Bgee; ENSMUSG00000085079; Expressed in animal zygote and 24 other tissues.
DR Genevisible; P0C7A0; MM.
DR GO; GO:0005737; C:cytoplasm; IDA:MGI.
DR GO; GO:0042802; F:identical protein binding; IDA:MGI.
DR GO; GO:0003723; F:RNA binding; IDA:MGI.
DR GO; GO:0006919; P:activation of cysteine-type endopeptidase activity involved in apoptotic process; IDA:MGI.
DR CDD; cd12795; FILIA_N_like; 1.
DR Gene3D; 3.30.1370.10; -; 1.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR InterPro; IPR031952; MOEP19_KH-like.
DR Pfam; PF16005; MOEP19; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; RNA-binding.
FT CHAIN 1..126
FT /note="KH homology domain-containing protein 1B"
FT /id="PRO_0000328819"
FT DOMAIN 19..78
FT /note="KH"
SQ SEQUENCE 126 AA; 14836 MW; 095E526CB64BE5FA CRC64;
MSDLRRKGWW NVPDYFYSPL VFDMEEDQED YIFGPDDEYL HTLEVHSNTL IQLERWFSPT
GQTRVTVVGP LKARLWVMDM IRKVGSKNTL DKIKGKLMLL HIRSHPLTDQ DLQIHLISGS
SCWFPD