ARAB_SERP5
ID ARAB_SERP5 Reviewed; 561 AA.
AC A8GE05;
DT 05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 13-NOV-2007, sequence version 1.
DT 25-MAY-2022, entry version 76.
DE RecName: Full=Ribulokinase {ECO:0000255|HAMAP-Rule:MF_00520};
DE EC=2.7.1.16 {ECO:0000255|HAMAP-Rule:MF_00520};
GN Name=araB {ECO:0000255|HAMAP-Rule:MF_00520}; OrderedLocusNames=Spro_2244;
OS Serratia proteamaculans (strain 568).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Serratia.
OX NCBI_TaxID=399741;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=568;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Taghavi S., Newman L.,
RA Vangronsveld J., van der Lelie D., Richardson P.;
RT "Complete sequence of chromosome of Serratia proteamaculans 568.";
RL Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + D-ribulose = ADP + D-ribulose 5-phosphate + H(+);
CC Xref=Rhea:RHEA:17601, ChEBI:CHEBI:15378, ChEBI:CHEBI:17173,
CC ChEBI:CHEBI:30616, ChEBI:CHEBI:58121, ChEBI:CHEBI:456216;
CC EC=2.7.1.16; Evidence={ECO:0000255|HAMAP-Rule:MF_00520};
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-ribulose = ADP + H(+) + L-ribulose 5-phosphate;
CC Xref=Rhea:RHEA:22072, ChEBI:CHEBI:15378, ChEBI:CHEBI:16880,
CC ChEBI:CHEBI:30616, ChEBI:CHEBI:58226, ChEBI:CHEBI:456216;
CC EC=2.7.1.16; Evidence={ECO:0000255|HAMAP-Rule:MF_00520};
CC -!- PATHWAY: Carbohydrate degradation; L-arabinose degradation via L-
CC ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route):
CC step 2/3. {ECO:0000255|HAMAP-Rule:MF_00520}.
CC -!- SIMILARITY: Belongs to the ribulokinase family. {ECO:0000255|HAMAP-
CC Rule:MF_00520}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP000826; ABV41345.1; -; Genomic_DNA.
DR RefSeq; WP_012144974.1; NC_009832.1.
DR AlphaFoldDB; A8GE05; -.
DR SMR; A8GE05; -.
DR STRING; 399741.Spro_2244; -.
DR EnsemblBacteria; ABV41345; ABV41345; Spro_2244.
DR KEGG; spe:Spro_2244; -.
DR eggNOG; COG1069; Bacteria.
DR HOGENOM; CLU_009281_9_1_6; -.
DR OMA; GHKAMWH; -.
DR OrthoDB; 1619686at2; -.
DR UniPathway; UPA00145; UER00566.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0019150; F:D-ribulokinase activity; IEA:RHEA.
DR GO; GO:0008741; F:ribulokinase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0019569; P:L-arabinose catabolic process to xylulose 5-phosphate; IEA:UniProtKB-UniRule.
DR CDD; cd07781; FGGY_RBK; 1.
DR HAMAP; MF_00520; Ribulokinase; 1.
DR InterPro; IPR043129; ATPase_NBD.
DR InterPro; IPR000577; Carb_kinase_FGGY.
DR InterPro; IPR018485; Carb_kinase_FGGY_C.
DR InterPro; IPR005929; Ribulokinase.
DR Pfam; PF02782; FGGY_C; 1.
DR PIRSF; PIRSF000538; GlpK; 1.
DR SUPFAM; SSF53067; SSF53067; 2.
DR TIGRFAMs; TIGR01234; L-ribulokinase; 1.
PE 3: Inferred from homology;
KW Arabinose catabolism; ATP-binding; Carbohydrate metabolism; Kinase;
KW Nucleotide-binding; Transferase.
FT CHAIN 1..561
FT /note="Ribulokinase"
FT /id="PRO_1000060920"
SQ SEQUENCE 561 AA; 61186 MW; 707F0E0082EA903F CRC64;
MTAGAIALGL DFGSDSVRVL AVDCHNGAEL DTEVVYYPRW QRGEFCNAAE NRFRHHPLDY
IEAMEQAIVT LVQRMPPQQR LQVIGIGVDS TGSTPAPIDE QGQVLALRPE FADNPNAMFV
LWKDHTAIEE ADAINRLCRS GEFPDYSRYI GGVYSSEWFW AKILHVTRQD AEVRQAAASW
VELCDWVPAL LSATTAPHQL KRGRCSVGHK TLWHPDWGGL PPKAFFAALD PLLVEHLPWP
LFEDCHTADL PVGTLSAEWA ARLGLPTTVV LSGGAFDCHM GAVGAGAQPY TLVKVIGTST
CDILIADRQR VDGRAIEGIC GQVDGSVVPG MIGMEAGQSA FGDMYAWFSR LLSWPLHAAA
KNQPELQPQL QKIEAGLLAA LTDAWVENPS LDHLPVVLDW FNGRRTPYAN QRLKGVIADL
NLGTDAPTLF GGFIAATAFG ARAIMECFEQ QDIPVDNVLA LGGIARKSPA IMQACADVMN
RPLQIVASDQ CCALGAAIFA AVAAGRFISV PEAQRQMACG IERTLQPDPQ RVARYQQLYQ
RYQQWCQAAE PRYAPTSGSA N