KIN17_ORYSJ
ID KIN17_ORYSJ Reviewed; 430 AA.
AC Q75LU5; Q9AY87;
DT 18-JAN-2017, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 134.
DE RecName: Full=KIN17-like protein {ECO:0000305};
GN Name=KIN17 {ECO:0000305};
GN OrderedLocusNames=Os03g0570300 {ECO:0000312|EMBL:BAF12433.1},
GN LOC_Os03g37330 {ECO:0000312|EMBL:ABF97196.1};
GN ORFNames=OSJNBa0004B24.17 {ECO:0000312|EMBL:AAG59654.1},
GN OSJNBb0015I21.3 {ECO:0000312|EMBL:AAR00634.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:Q9ZVU5}.
CC -!- SIMILARITY: Belongs to the KIN17 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAG59654.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC084319; AAG59654.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC091302; AAR00634.1; -; Genomic_DNA.
DR EMBL; DP000009; ABF97196.1; -; Genomic_DNA.
DR EMBL; AP008209; BAF12433.1; -; Genomic_DNA.
DR EMBL; AP014959; BAS84985.1; -; Genomic_DNA.
DR EMBL; AK069396; BAG91411.1; -; mRNA.
DR RefSeq; XP_015631711.1; XM_015776225.1.
DR RefSeq; XP_015631712.1; XM_015776226.1.
DR RefSeq; XP_015631713.1; XM_015776227.1.
DR AlphaFoldDB; Q75LU5; -.
DR SMR; Q75LU5; -.
DR STRING; 4530.OS03T0570300-01; -.
DR iPTMnet; Q75LU5; -.
DR PaxDb; Q75LU5; -.
DR PRIDE; Q75LU5; -.
DR EnsemblPlants; Os03t0570300-01; Os03t0570300-01; Os03g0570300.
DR Gramene; Os03t0570300-01; Os03t0570300-01; Os03g0570300.
DR KEGG; osa:4333285; -.
DR eggNOG; KOG2837; Eukaryota.
DR HOGENOM; CLU_030065_1_0_1; -.
DR InParanoid; Q75LU5; -.
DR OMA; DKGHVHM; -.
DR OrthoDB; 1420569at2759; -.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003690; F:double-stranded DNA binding; IBA:GO_Central.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006974; P:cellular response to DNA damage stimulus; IBA:GO_Central.
DR GO; GO:0006260; P:DNA replication; IBA:GO_Central.
DR CDD; cd13155; KOW_KIN17; 1.
DR Gene3D; 1.10.10.2030; -; 1.
DR Gene3D; 2.30.30.30; -; 1.
DR InterPro; IPR019447; DNA/RNA-bd_Kin17_WH-like_dom.
DR InterPro; IPR037321; KIN17-like.
DR InterPro; IPR038254; KIN17_WH-like_sf.
DR InterPro; IPR041330; KN17_SH3.
DR InterPro; IPR041995; KOW_KIN17.
DR InterPro; IPR014722; Rib_L2_dom2.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR PANTHER; PTHR12805; PTHR12805; 1.
DR Pfam; PF10357; Kin17_mid; 1.
DR Pfam; PF18131; KN17_SH3; 1.
DR SMART; SM01253; Kin17_mid; 1.
DR SUPFAM; SSF57667; SSF57667; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Metal-binding; Nucleus; Reference proteome; Zinc; Zinc-finger.
FT CHAIN 1..430
FT /note="KIN17-like protein"
FT /id="PRO_0000438806"
FT ZN_FING 28..50
FT /note="C2H2-type"
FT /evidence="ECO:0000255"
FT REGION 51..160
FT /note="Winged helix-turn-helix (wHTH)"
FT /evidence="ECO:0000250|UniProtKB:O60870"
FT REGION 179..230
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 261..284
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 319..370
FT /note="C-terminal subdomain A"
FT /evidence="ECO:0000250|UniProtKB:O60870"
FT REGION 376..427
FT /note="C-terminal subdomain B"
FT /evidence="ECO:0000250|UniProtKB:O60870"
FT COILED 147..183
FT /evidence="ECO:0000255"
FT COILED 283..312
FT /evidence="ECO:0000255"
FT MOTIF 155..158
FT /note="Nuclear localization signal (NLS)"
FT /evidence="ECO:0000305"
FT COMPBIAS 196..217
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 430 AA; 49068 MW; 6151D748ED2F4690 CRC64;
MGKHEFLTPK AIANRIKAKG LQKLRWYCQM CQKQCRDENG FKCHCMSESH QRQMQVFGQA
PDRVVEGFSE EFLDAFLTLL RRAHRHSRIA ATVVYNEFIA DRHHVHMNST RWATLTEFVK
FLGREGHCKV EDTPKGWFIT YIDRDSEQAV KARLKRKRIK SDLAEDERQE RMIARQIERA
QQSMGKTNGE LGDDASPDGS EGESGSEDEY SDSENDHEGQ EEDAKEANKA AGKIAIALQR
AVPGPKVNPL DDKPKVKFGF EEEDEVSARD KEKEELAKKK GKDAINAAEA RRSALDELMK
EEEKAKERSN RKDYWLCPGI VVKVMSKSLA EKGYCKQKGV VKRVIDKYVG EIEMLESKHV
LRVDQDELET VIPQIGGLVR IVNGAYRGSN ARLLSVDTER FCAKVQVEKG LYDGKVLKAI
EYEDICKIFH
