ID   ARAB_VIBPA              Reviewed;         567 AA.
AC   Q87FK5;
DT   30-MAY-2003, integrated into UniProtKB/Swiss-Prot.
DT   30-MAY-2003, sequence version 1.
DT   25-MAY-2022, entry version 95.
DE   RecName: Full=Ribulokinase {ECO:0000255|HAMAP-Rule:MF_00520};
DE            EC=2.7.1.16 {ECO:0000255|HAMAP-Rule:MF_00520};
GN   Name=araB {ECO:0000255|HAMAP-Rule:MF_00520}; OrderedLocusNames=VPA1674;
OS   Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Vibrio.
OX   NCBI_TaxID=223926;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=RIMD 2210633;
RX   PubMed=12620739; DOI=10.1016/s0140-6736(03)12659-1;
RA   Makino K., Oshima K., Kurokawa K., Yokoyama K., Uda T., Tagomori K.,
RA   Iijima Y., Najima M., Nakano M., Yamashita A., Kubota Y., Kimura S.,
RA   Yasunaga T., Honda T., Shinagawa H., Hattori M., Iida T.;
RT   "Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism
RT   distinct from that of V. cholerae.";
RL   Lancet 361:743-749(2003).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + D-ribulose = ADP + D-ribulose 5-phosphate + H(+);
CC         Xref=Rhea:RHEA:17601, ChEBI:CHEBI:15378, ChEBI:CHEBI:17173,
CC         ChEBI:CHEBI:30616, ChEBI:CHEBI:58121, ChEBI:CHEBI:456216;
CC         EC=2.7.1.16; Evidence={ECO:0000255|HAMAP-Rule:MF_00520};
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + L-ribulose = ADP + H(+) + L-ribulose 5-phosphate;
CC         Xref=Rhea:RHEA:22072, ChEBI:CHEBI:15378, ChEBI:CHEBI:16880,
CC         ChEBI:CHEBI:30616, ChEBI:CHEBI:58226, ChEBI:CHEBI:456216;
CC         EC=2.7.1.16; Evidence={ECO:0000255|HAMAP-Rule:MF_00520};
CC   -!- PATHWAY: Carbohydrate degradation; L-arabinose degradation via L-
CC       ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route):
CC       step 2/3. {ECO:0000255|HAMAP-Rule:MF_00520}.
CC   -!- SIMILARITY: Belongs to the ribulokinase family. {ECO:0000255|HAMAP-
CC       Rule:MF_00520}.
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DR   EMBL; BA000032; BAC63017.1; -; Genomic_DNA.
DR   RefSeq; NP_801184.1; NC_004605.1.
DR   RefSeq; WP_005460432.1; NC_004605.1.
DR   AlphaFoldDB; Q87FK5; -.
DR   SMR; Q87FK5; -.
DR   STRING; 223926.28810076; -.
DR   EnsemblBacteria; BAC63017; BAC63017; BAC63017.
DR   GeneID; 1192370; -.
DR   KEGG; vpa:VPA1674; -.
DR   PATRIC; fig|223926.6.peg.4592; -.
DR   eggNOG; COG1069; Bacteria.
DR   HOGENOM; CLU_009281_9_1_6; -.
DR   OMA; GHKAMWH; -.
DR   UniPathway; UPA00145; UER00566.
DR   Proteomes; UP000002493; Chromosome 2.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0019150; F:D-ribulokinase activity; IEA:RHEA.
DR   GO; GO:0008741; F:ribulokinase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0019569; P:L-arabinose catabolic process to xylulose 5-phosphate; IEA:UniProtKB-UniRule.
DR   CDD; cd07781; FGGY_RBK; 1.
DR   HAMAP; MF_00520; Ribulokinase; 1.
DR   InterPro; IPR043129; ATPase_NBD.
DR   InterPro; IPR000577; Carb_kinase_FGGY.
DR   InterPro; IPR018485; Carb_kinase_FGGY_C.
DR   InterPro; IPR018484; Carb_kinase_FGGY_N.
DR   InterPro; IPR005929; Ribulokinase.
DR   Pfam; PF02782; FGGY_C; 1.
DR   Pfam; PF00370; FGGY_N; 1.
DR   PIRSF; PIRSF000538; GlpK; 1.
DR   SUPFAM; SSF53067; SSF53067; 2.
DR   TIGRFAMs; TIGR01234; L-ribulokinase; 1.
PE   3: Inferred from homology;
KW   Arabinose catabolism; ATP-binding; Carbohydrate metabolism; Kinase;
KW   Nucleotide-binding; Reference proteome; Transferase.
FT   CHAIN           1..567
FT                   /note="Ribulokinase"
FT                   /id="PRO_0000198376"
SQ   SEQUENCE   567 AA;  61789 MW;  B303B547EBEA9B8B CRC64;
     MDTINTHQQH VIGLDFGSDS VRALIVNAET GQEVSSSVVY YSRWMKGLYC QPAQSQFRHH
     PQDYLDAMTS AIQEVLATVP QTLADSVVGI GVDTTGSTPA PIDENGTVLA LLPEFEHNPN
     AMFVLWKDHT SVAKADRINE LAHSGKFTDY TRYVGGVYSS EWFWAKAAWV SEQDEQVAKR
     AFSWVELCDW IPAILADTQH PQKLRRGICA AGHKAMWHES WGGLPEQAFL SAISPTLDGI
     RDRMFTEVFT SDQAAGYLSK AWAIKLGLPE GIAIAIGEFD CHMGAVGAGA GANDLVKVIG
     TSTCDILMVE SQNVGDRTIH GICGQVEGSA MPELLALEAG QSAFGDMYAW FKNVLMWPLQ
     AYAEHNPDFA LTAEEIASEL LPMLSQAAEQ QGIDQYTPVA MDWLNGRRTP YANQRLKGAI
     CDLNLGSSSP AIFSALVEST AHGAKAIVDC FIEQDVTVER VIAIGGIAQK SPYVMQMCAD
     VIGRDIIVVE SDQCCALGAA IFAAVAAGVY PTTKSAQAVM ASPVRQTYSP TPKVQTLRAQ
     RYATYRELGQ HMEQIAEFHQ SQEREDV