ARAC_DICCH
ID ARAC_DICCH Reviewed; 310 AA.
AC P07642;
DT 01-APR-1988, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1988, sequence version 1.
DT 03-AUG-2022, entry version 108.
DE RecName: Full=Arabinose operon regulatory protein;
GN Name=araC {ECO:0000303|PubMed:3902795};
OS Dickeya chrysanthemi (Pectobacterium chrysanthemi) (Erwinia chrysanthemi).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Pectobacteriaceae; Dickeya.
OX NCBI_TaxID=556;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=3902795; DOI=10.1128/jb.164.2.717-722.1985;
RA Lei S.-P., Lin H.-C., Heffernan L., Wilcox G.;
RT "araB gene and nucleotide sequence of the araC gene of Erwinia
RT carotovora.";
RL J. Bacteriol. 164:717-722(1985).
CC -!- FUNCTION: Transcription factor that regulates the expression of several
CC genes involved in the transport and metabolism of L-arabinose.
CC {ECO:0000250|UniProtKB:P0A9E0}.
CC -!- SUBUNIT: Homodimer. {ECO:0000250|UniProtKB:P0A9E0}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:P0A9E0}.
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DR EMBL; M11981; AAA24811.1; -; Genomic_DNA.
DR AlphaFoldDB; P07642; -.
DR SMR; P07642; -.
DR PRIDE; P07642; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0019568; P:arabinose catabolic process; IEA:UniProtKB-KW.
DR InterPro; IPR003313; AraC-bd.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR037923; HTH-like.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR Pfam; PF02311; AraC_binding; 1.
DR Pfam; PF12833; HTH_18; 1.
DR PRINTS; PR00032; HTHARAC.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; SSF46689; 2.
DR SUPFAM; SSF51215; SSF51215; 1.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 3: Inferred from homology;
KW Activator; Arabinose catabolism; Carbohydrate metabolism; Cytoplasm;
KW DNA-binding; Repressor; Transcription; Transcription regulation.
FT CHAIN 1..310
FT /note="Arabinose operon regulatory protein"
FT /id="PRO_0000194501"
FT DOMAIN 186..284
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00593"
FT DNA_BIND 203..224
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00593"
FT DNA_BIND 251..274
FT /note="H-T-H motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00593"
FT BINDING 13
FT /ligand="alpha-L-arabinopyanose"
FT /ligand_id="ChEBI:CHEBI:46987"
FT /evidence="ECO:0000250|UniProtKB:P0A9E0"
FT BINDING 29
FT /ligand="alpha-L-arabinopyanose"
FT /ligand_id="ChEBI:CHEBI:46987"
FT /evidence="ECO:0000250|UniProtKB:P0A9E0"
FT BINDING 43
FT /ligand="alpha-L-arabinopyanose"
FT /ligand_id="ChEBI:CHEBI:46987"
FT /evidence="ECO:0000250|UniProtKB:P0A9E0"
FT BINDING 87
FT /ligand="alpha-L-arabinopyanose"
FT /ligand_id="ChEBI:CHEBI:46987"
FT /evidence="ECO:0000250|UniProtKB:P0A9E0"
FT BINDING 98
FT /ligand="alpha-L-arabinopyanose"
FT /ligand_id="ChEBI:CHEBI:46987"
FT /evidence="ECO:0000250|UniProtKB:P0A9E0"
SQ SEQUENCE 310 AA; 35854 MW; B718C9F4B264B0AF CRC64;
MYHRMAHESQ PNPLLPGYSF NAYLVAGLTP ILAEGPLDFF IDRPDGMKGY IINLTMKGQG
QIFDGDETFF CNPGDLLLFP PKSTHFYGRS PSSDCWYHRW VYFRPRAYWA DWLEWHTKSS
GIGRMSLPNN QLLLEFDRLF ANIEQTQRSG RRFSEELGMN LLERLLLRAM EEDPQSPQKI
MDPRVIEACQ FITSNLAGEL RIDEVARHVC LSPSRLAHLF REQVGINILR WREDQRVIRA
KLLLQTTQES IANIGRVVGY DDQLYFSRVF RKRVGVSPSD FRRRSSEINY PAAKTLPVAW
GEQIPHAVSS