KLH38_DANRE
ID KLH38_DANRE Reviewed; 583 AA.
AC Q1LYM6;
DT 18-MAR-2008, integrated into UniProtKB/Swiss-Prot.
DT 30-MAY-2006, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=Kelch-like protein 38;
GN Name=klhl38; ORFNames=si:dkey-5e12.1;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen;
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M.,
RA Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I.,
RA Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.,
RA White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y.,
RA Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B.,
RA Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S.,
RA Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S.,
RA Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N.,
RA Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J.,
RA Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J.,
RA Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D.,
RA McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S.,
RA Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E.,
RA Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A.,
RA Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P.,
RA Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C.,
RA Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C.,
RA Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M.,
RA Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., Raddatz G.,
RA Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F.,
RA Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M.,
RA Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M.,
RA de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C.,
RA Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the human
RT genome.";
RL Nature 496:498-503(2013).
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DR EMBL; BX004966; CAK11118.1; -; Genomic_DNA.
DR RefSeq; NP_001038350.1; NM_001044885.1.
DR RefSeq; XP_005159683.1; XM_005159626.3.
DR RefSeq; XP_009292600.1; XM_009294325.2.
DR AlphaFoldDB; Q1LYM6; -.
DR SMR; Q1LYM6; -.
DR STRING; 7955.ENSDARP00000052077; -.
DR PaxDb; Q1LYM6; -.
DR Ensembl; ENSDART00000052078; ENSDARP00000052077; ENSDARG00000031383.
DR Ensembl; ENSDART00000177791; ENSDARP00000143526; ENSDARG00000116001.
DR GeneID; 559083; -.
DR KEGG; dre:559083; -.
DR CTD; 559083; -.
DR ZFIN; ZDB-GENE-060503-737; klhl38a.
DR eggNOG; KOG4441; Eukaryota.
DR GeneTree; ENSGT00940000157647; -.
DR HOGENOM; CLU_004253_14_6_1; -.
DR InParanoid; Q1LYM6; -.
DR OMA; CLTLQCV; -.
DR OrthoDB; 292812at2759; -.
DR PhylomeDB; Q1LYM6; -.
DR TreeFam; TF329218; -.
DR PRO; PR:Q1LYM6; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 19.
DR Bgee; ENSDARG00000031383; Expressed in muscle tissue and 5 other tissues.
DR ExpressionAtlas; Q1LYM6; baseline.
DR Gene3D; 2.120.10.80; -; 2.
DR Gene3D; 3.30.710.10; -; 1.
DR InterPro; IPR011705; BACK.
DR InterPro; IPR017096; BTB-kelch_protein.
DR InterPro; IPR000210; BTB/POZ_dom.
DR InterPro; IPR015915; Kelch-typ_b-propeller.
DR InterPro; IPR006652; Kelch_1.
DR InterPro; IPR030568; KLHL38.
DR InterPro; IPR011333; SKP1/BTB/POZ_sf.
DR PANTHER; PTHR24412:SF462; PTHR24412:SF462; 1.
DR Pfam; PF07707; BACK; 1.
DR Pfam; PF00651; BTB; 1.
DR Pfam; PF01344; Kelch_1; 4.
DR PIRSF; PIRSF037037; Kelch-like_protein_gigaxonin; 1.
DR SMART; SM00875; BACK; 1.
DR SMART; SM00225; BTB; 1.
DR SMART; SM00612; Kelch; 6.
DR SUPFAM; SSF117281; SSF117281; 1.
DR SUPFAM; SSF54695; SSF54695; 1.
DR PROSITE; PS50097; BTB; 1.
PE 4: Predicted;
KW Kelch repeat; Reference proteome; Repeat.
FT CHAIN 1..583
FT /note="Kelch-like protein 38"
FT /id="PRO_0000325812"
FT DOMAIN 34..101
FT /note="BTB"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00037"
FT DOMAIN 136..237
FT /note="BACK"
FT REPEAT 285..332
FT /note="Kelch 1"
FT REPEAT 333..385
FT /note="Kelch 2"
FT REPEAT 386..433
FT /note="Kelch 3"
FT REPEAT 435..481
FT /note="Kelch 4"
FT REPEAT 482..523
FT /note="Kelch 5"
FT REPEAT 525..575
FT /note="Kelch 6"
SQ SEQUENCE 583 AA; 66842 MW; 54E03796FD1C7CB4 CRC64;
MASTSTEVFP FKDQELSTQL LFQLNILRQE QIFTDVILCT EDKEIPCHRN VLVSSSPYFR
AMFCSNFRES SQARVDLKGI ASEVIECVVD YIYTGSITIT MELVLPLMQA ASMLQYGRLF
EACSTFLQEQ LNPENCLSMI RLSEILHCET LKERAKEMAV RCFSDVAASE DFCELTLPEL
MCYLEDDRLC AEEEQVFETL LAWIHHDPFS RRGAIHDLFK KVRLRFIHPT YLFQFIANDP
LVQSSTLCTE IIESVRRLMF SVSAKCTKEL KPLWTTPRRY TCRETLVVVG GRKNNEQTSR
EALLYDERTQ RWQWLAKLPL RLYKAAYVCI HSILYVVGGL SLSLVSGDSA VSATVYTLSL
KTNQWRTAEP MLEPRYAHQC VSYLHFIFAL GGIGQDKQIS NTVERYNSMF NQWEVMAPMP
TAVLHPAVAA NDQRIYVFGG EDALQNPVRL IQVYHISRNL WSRLETRTVK NVCAPAAVIE
DKIYIVGGYT RRVIAYDTKA NKFVKCTNMK ERRMHHAATV INNKLYVTGG RFLNSHDVIE
DSDCFECYDP KTDVWTSKGS LPYKLFDHGS LPLICVSNRP NPP