KN13B_ORYSJ
ID KN13B_ORYSJ Reviewed; 707 AA.
AC B9EY52; A0A0P0V5H8;
DT 07-SEP-2016, integrated into UniProtKB/Swiss-Prot.
DT 07-SEP-2016, sequence version 2.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=Kinesin-like protein KIN-13B {ECO:0000305};
GN Name=KIN13B {ECO:0000305};
GN OrderedLocusNames=Os01g0625200 {ECO:0000312|EMBL:BAS73247.1},
GN LOC_Os01g43580 {ECO:0000305};
GN ORFNames=OsJ_02667 {ECO:0000312|EMBL:EEE55015.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 505-707.
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=19106179; DOI=10.1093/aob/mcn248;
RA Guo L., Ho C.M., Kong Z., Lee Y.R., Qian Q., Liu B.;
RT "Evaluating the microtubule cytoskeleton and its interacting proteins in
RT monocots by mining the rice genome.";
RL Ann. Bot. 103:387-402(2009).
CC -!- SIMILARITY: Belongs to the TRAFAC class myosin-kinesin ATPase
CC superfamily. Kinesin family. KIN-13 subfamily.
CC {ECO:0000303|PubMed:19106179}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAS73247.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AP014957; BAS73247.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CM000138; EEE55015.1; -; Genomic_DNA.
DR EMBL; AK071022; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015620912.1; XM_015765426.1.
DR AlphaFoldDB; B9EY52; -.
DR SMR; B9EY52; -.
DR STRING; 4530.OS01T0625200-01; -.
DR PRIDE; B9EY52; -.
DR GeneID; 4326684; -.
DR KEGG; osa:4326684; -.
DR eggNOG; KOG0246; Eukaryota.
DR HOGENOM; CLU_001485_19_2_1; -.
DR OrthoDB; 418348at2759; -.
DR Proteomes; UP000007752; Chromosome 1.
DR Proteomes; UP000059680; Chromosome 1.
DR GO; GO:0005874; C:microtubule; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0008017; F:microtubule binding; IEA:InterPro.
DR GO; GO:0003777; F:microtubule motor activity; IBA:GO_Central.
DR GO; GO:0007019; P:microtubule depolymerization; IBA:GO_Central.
DR GO; GO:0007018; P:microtubule-based movement; IEA:InterPro.
DR Gene3D; 3.40.850.10; -; 1.
DR InterPro; IPR019821; Kinesin_motor_CS.
DR InterPro; IPR001752; Kinesin_motor_dom.
DR InterPro; IPR036961; Kinesin_motor_dom_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR Pfam; PF00225; Kinesin; 1.
DR PRINTS; PR00380; KINESINHEAVY.
DR SMART; SM00129; KISc; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR PROSITE; PS00411; KINESIN_MOTOR_1; 1.
DR PROSITE; PS50067; KINESIN_MOTOR_2; 1.
PE 2: Evidence at transcript level;
KW ATP-binding; Coiled coil; Microtubule; Motor protein; Nucleotide-binding;
KW Reference proteome.
FT CHAIN 1..707
FT /note="Kinesin-like protein KIN-13B"
FT /id="PRO_0000437201"
FT DOMAIN 152..477
FT /note="Kinesin motor"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00283"
FT COILED 619..656
FT /evidence="ECO:0000255"
FT BINDING 243..250
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00283"
FT CONFLICT 72..75
FT /note="QQLS -> HHLT (in Ref. 3; EEE55015)"
FT /evidence="ECO:0000305"
FT CONFLICT 82
FT /note="H -> Q (in Ref. 3; EEE55015)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 707 AA; 78528 MW; 40AEA8739294FB27 CRC64;
MNGGGRRRYS SEQLMFDVPA NAGGGAGKWG QRGGVRRGDG EIFVSVEPTT PARLRGGEAA
AAAAGESPGQ RQQLSPGLLD LHAFDTELIS DFQVPGIGMY DGAQKFGYGN GGFDDSDPTF
APNKQMSKST VFAESNFLKA FPEKEKAAPV AKIKVVVRKR PLNKKEISKK EEDIIDIEQQ
SNSLTVHETK LKVDLTEYVE KHEFVFDAVL DEDVSNDEVY RETVEPVVPA IFNRTKATCF
AYGQTGSGKT YTMRPLPLKA SQDILRLMHH TYRNQGYQLF VSFFEIYGGK LFDLLNERSK
LCMREDGKQK VCIVGLQEYR VSDVETIKEL IEKGNATRST GTTGANEESS RSHAILQLAI
KKRVDGNDSK PPRLAGKLSF IDLAGSERGA DTTDNDKQTR IEGAEINKSL LALKECIRAL
DNDQTHIPFR GSKLTEVLRD SFIGDSRTVM ISCISPSSGS CEHTLNTLRY ADRVKSLSKG
SNTKKDLSLA AAPLRESSPS LLASAVPSFS SAEVMNDITE RSNFGWTKQQ YVKEHQAPTF
VDRMQKVKED TEFSLSNGGY FKEQRTKGSV PVGIAEVPDT VYQQGRQPTR KARDLTSDNN
MRNSIAYPII RRVVPDEDEH LNELLQEEED LVSAHRKQVE ETLDMIKEEM NLLVEADQPG
NQLDDYITRL SGILSQKAAG IVDLQARLAQ FQRRLNENNV LLYAQCP