KRP3_ORYSJ
ID KRP3_ORYSJ Reviewed; 225 AA.
AC Q2R185; Q283L2;
DT 24-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 24-JUL-2007, sequence version 2.
DT 03-AUG-2022, entry version 80.
DE RecName: Full=Cyclin-dependent kinase inhibitor 3;
DE AltName: Full=KIP-related protein 3;
GN Name=KRP3; OrderedLocusNames=Os11g0614800, LOC_Os11g40030;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND DEVELOPMENTAL STAGE.
RX PubMed=17012406; DOI=10.1104/pp.106.087056;
RA Barroco R.M., Peres A., Droual A.-M., de Veylder L., Nguyen L.S.L.,
RA de Wolf J., Mironov V., Peerbolte R., Beemster G.T.S., Inze D.,
RA Broekaert W.F., Frankard V.;
RT "The cyclin-dependent kinase inhibitor Orysa;KRP1 plays an important role
RT in seed development of rice.";
RL Plant Physiol. 142:1053-1064(2006).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP GENE FAMILY.
RX PubMed=17443292; DOI=10.1007/s11103-007-9154-y;
RA Guo J., Song J., Wang F., Zhang X.S.;
RT "Genome-wide identification and expression analysis of rice cell cycle
RT genes.";
RL Plant Mol. Biol. 64:349-360(2007).
CC -!- DEVELOPMENTAL STAGE: Highly expressed 2 days after pollination and then
CC rapidly decreases to basal level. {ECO:0000269|PubMed:17012406}.
CC -!- SIMILARITY: Belongs to the CDI family. ICK/KRP subfamily.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=ABA94861.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=BAF28634.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; DQ229364; ABB70060.1; -; mRNA.
DR EMBL; DP000010; ABA94861.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP008217; BAF28634.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014967; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_015616530.1; XM_015761044.1.
DR AlphaFoldDB; Q2R185; -.
DR STRING; 4530.OS11T0614800-00; -.
DR PaxDb; Q2R185; -.
DR PRIDE; Q2R185; -.
DR GeneID; 4350915; -.
DR KEGG; osa:4350915; -.
DR eggNOG; ENOG502S5ZH; Eukaryota.
DR InParanoid; Q2R185; -.
DR OrthoDB; 1820605at2759; -.
DR PlantReactome; R-OSA-9630286; Cell cycle regulation.
DR PlantReactome; R-OSA-9640760; G1 phase.
DR Proteomes; UP000000763; Chromosome 11.
DR Proteomes; UP000059680; Chromosome 11.
DR Genevisible; Q2R185; OS.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0004861; F:cyclin-dependent protein serine/threonine kinase inhibitor activity; IEA:InterPro.
DR Gene3D; 4.10.365.10; -; 1.
DR InterPro; IPR003175; CDI_dom.
DR InterPro; IPR044898; CDI_dom_sf.
DR InterPro; IPR044275; KRP.
DR PANTHER; PTHR46776; PTHR46776; 1.
DR Pfam; PF02234; CDI; 1.
PE 2: Evidence at transcript level;
KW Protein kinase inhibitor; Reference proteome.
FT CHAIN 1..225
FT /note="Cyclin-dependent kinase inhibitor 3"
FT /id="PRO_0000295666"
FT REGION 47..94
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 130..169
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 225 AA; 23719 MW; E6248325DD7AC490 CRC64;
MGKYLRSSCK QQQQPSSPAA VASVAAAAVS SYSYLTLRSG RRVPAAAAAA GGSACRRRHR
RGGRRGCAKN GAGSARACGA RSPTSSASSG QRRRCEAVEC SHGGGRAELS RSPPLGNSVV
VVSGDVVSGE RKSLKPNSCS REVAAEHAGE HKHNPAAAAA AGRRPPLSPP EAEIEAFFAA
AELAERRRFA EKYNYDIALD RPLQGRYEWE PTVPNFDVAK DVTDM