LADIS_STRCL
ID LADIS_STRCL Reviewed; 545 AA.
AC D5SJ87;
DT 18-JUL-2018, integrated into UniProtKB/Swiss-Prot.
DT 13-JUL-2010, sequence version 1.
DT 25-MAY-2022, entry version 46.
DE RecName: Full=Labda-7,13-dienyl diphosphate synthase {ECO:0000303|PubMed:26814669};
DE EC=5.5.1.30 {ECO:0000305|PubMed:26814669};
DE AltName: Full=Type-B diterpene synthase {ECO:0000303|PubMed:26814669};
GN ORFNames=SCLAV_p0490 {ECO:0000312|EMBL:EFG03980.2};
OS Streptomyces clavuligerus.
OG Plasmid pSCL4 {ECO:0000312|EMBL:EFG03980.2,
OG ECO:0000312|Proteomes:UP000002357}.
OC Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC Streptomyces.
OX NCBI_TaxID=1901;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL
RC 3585 / VKM Ac-602 {ECO:0000312|Proteomes:UP000002357};
RX PubMed=20624727; DOI=10.1093/gbe/evq013;
RA Medema M.H., Trefzer A., Kovalchuk A., van den Berg M., Mueller U.,
RA Heijne W., Wu L., Alam M.T., Ronning C.M., Nierman W.C., Bovenberg R.A.L.,
RA Breitling R., Takano E.;
RT "The sequence of a 1.8-mb bacterial linear plasmid reveals a rich
RT evolutionary reservoir of secondary metabolic pathways.";
RL Genome Biol. Evol. 2:212-224(2010).
RN [2]
RP FUNCTION, CATALYTIC ACTIVITY, COFACTOR, AND DOMAIN.
RC STRAIN=ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL
RC 3585 / VKM Ac-602;
RX PubMed=26814669; DOI=10.1038/ja.2015.147;
RA Yamada Y., Komatsu M., Ikeda H.;
RT "Chemical diversity of labdane-type bicyclic diterpene biosynthesis in
RT Actinomycetales microorganisms.";
RL J. Antibiot. 69:515-523(2016).
CC -!- FUNCTION: Involved in the biosynthesis of the labdane-type bicyclic
CC diterpene labda-7,13(16),14-triene. Catalyzes the conversion of
CC geranylgeranyl diphosphate (GGDP) into labda-7,13(E)-dienyl
CC diphosphate. {ECO:0000269|PubMed:26814669}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2E,6E,10E)-geranylgeranyl diphosphate = (13E)-labda-7,13-
CC dien-15-yl diphosphate; Xref=Rhea:RHEA:54692, ChEBI:CHEBI:58756,
CC ChEBI:CHEBI:63682; EC=5.5.1.30;
CC Evidence={ECO:0000305|PubMed:26814669};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000305|PubMed:26814669};
CC -!- DOMAIN: The Asp-Xaa-Asp-Asp-Thr-Ala (DXDDTA) and Arg-Xaa-Xaa-Asp-Gly-
CC Ser-Trp (RXXDGSW) motifs are expected to bind to Mg(2+).
CC {ECO:0000305|PubMed:26814669}.
CC -!- SIMILARITY: Belongs to the terpene synthase family. {ECO:0000305}.
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DR EMBL; CM000914; EFG03980.2; -; Genomic_DNA.
DR RefSeq; WP_003963126.1; NZ_CP027859.1.
DR AlphaFoldDB; D5SJ87; -.
DR SMR; D5SJ87; -.
DR STRING; 443255.SCLAV_p0490; -.
DR KEGG; ag:EFG03980; -.
DR eggNOG; COG1657; Bacteria.
DR OMA; RWHASPY; -.
DR OrthoDB; 260889at2; -.
DR BRENDA; 5.5.1.30; 5988.
DR Proteomes; UP000002357; Plasmid pSCL4.
DR GO; GO:0016853; F:isomerase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR032696; SQ_cyclase_C.
DR InterPro; IPR008930; Terpenoid_cyclase/PrenylTrfase.
DR Pfam; PF13243; SQHop_cyclase_C; 1.
DR SUPFAM; SSF48239; SSF48239; 1.
PE 1: Evidence at protein level;
KW Isomerase; Magnesium; Metal-binding; Plasmid; Reference proteome.
FT CHAIN 1..545
FT /note="Labda-7,13-dienyl diphosphate synthase"
FT /id="PRO_0000444809"
FT REGION 526..545
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 315..320
FT /note="DXDDTA motif"
FT /evidence="ECO:0000305|PubMed:26814669"
FT MOTIF 444..450
FT /note="RXXDGSW motif"
FT /evidence="ECO:0000305|PubMed:26814669"
SQ SEQUENCE 545 AA; 58120 MW; F6D66C8F44809D46 CRC64;
MPVDVGTLPP PAPREAVSAA AHLLASVDGD PWGRTSPTVY ETARVHAWAP HLPGRDRRVT
WLLDQQRAGG LWGDGPPAYQ VLPTLAAVTA LLAELDRHPE AGHSSLGGRL AAAVAAGLDT
LHGLSHHDPL PDTAAVELLV PGLITEVNDR LDAIDPEAAH PALAPVPHGR RLTAVHGIPA
LPRHRLAERL ARFARLPVKL HHCFEALAPV CPPGLVPARP DHLLGSSSAA TAAWLATATA
APGAPGLDRL LRSTAARYGG LFPETARITV FERLWVLTTL HRAGLLATFE PLARRWVSAL
AAPGGVPGVP GFEPDADDTA VTLHLATELG VPYRPEVLDP FRTGDHFACY LGEDTGSVST
NAHVLLALGT WTRHHPDTAD HGNTIRLLGR WLVERQHGDG HWDDKWHASP YYATAKVTAA
LSRHGGPEAA DALRRAARWV RETRRTDGSW GIWGGTAEET AYAAQILLDA PEPPTDVLGC
AHAHLTARAD DDGPPPALWH DKTLFAPDAI VRAEVLSTLR RLDRRLPAPA PVPPGFDAAR
TGPAD