LAX2_ORYSJ
ID LAX2_ORYSJ Reviewed; 394 AA.
AC G3XKQ9; A0A0P0W9N6; A0A1U9WT22; Q7X6C5;
DT 25-OCT-2017, integrated into UniProtKB/Swiss-Prot.
DT 14-DEC-2011, sequence version 1.
DT 03-AUG-2022, entry version 37.
DE RecName: Full=Protein LAX PANICLE 2 {ECO:0000303|PubMed:21963665};
GN Name=LAX2 {ECO:0000303|PubMed:21963665};
GN Synonyms=GNP4 {ECO:0000312|EMBL:AQY56563.1};
GN OrderedLocusNames=Os04g0396500 {ECO:0000312|EMBL:BAS89006.1},
GN LOC_Os04g32510 {ECO:0000305};
GN ORFNames=OSJNBa0039C07.1 {ECO:0000312|EMBL:CAE05145.2},
GN OSJNBb0039F02.5 {ECO:0000312|EMBL:CAD40774.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, INTERACTION WITH LAX1, SUBCELLULAR
RP LOCATION, AND DISRUPTION PHENOTYPE.
RC STRAIN=cv. Nipponbare;
RX PubMed=21963665; DOI=10.1105/tpc.111.088765;
RA Tabuchi H., Zhang Y., Hattori S., Omae M., Shimizu-Sato S., Oikawa T.,
RA Qian Q., Nishimura M., Kitano H., Xie H., Fang X., Yoshida H., Kyozuka J.,
RA Chen F., Sato Y.;
RT "LAX PANICLE2 of rice encodes a novel nuclear protein and regulates the
RT formation of axillary meristems.";
RL Plant Cell 23:3276-3287(2011).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Peterson S.W.;
RT "Oryza sativa RAWUL domain protein (Gnp4) mRNA.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447439; DOI=10.1038/nature01183;
RA Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA Li J., Hong G., Xue Y., Han B.;
RT "Sequence and analysis of rice chromosome 4.";
RL Nature 420:316-320(2002).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
CC -!- FUNCTION: Involved in the regulation of shoot branching by controlling
CC axillary meristem (AM) formation. Functions in association with LAX1 to
CC regulate the process of AM formation. Possesses transactivation
CC activity in yeast. {ECO:0000269|PubMed:21963665}.
CC -!- SUBUNIT: Interacts with LAX1. {ECO:0000269|PubMed:21963665}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:21963665}.
CC -!- DISRUPTION PHENOTYPE: Absence of axillary meristem (AM) in most of the
CC lateral branching of the panicle, and reduced number of AMs at the
CC vegetative stage. {ECO:0000269|PubMed:21963665}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAS89006.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAD40774.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=CAE05145.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB669025; BAL03066.1; -; mRNA.
DR EMBL; KY673700; AQY56563.1; -; mRNA.
DR EMBL; AL662997; CAD40774.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL731591; CAE05145.2; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014960; BAS89006.1; ALT_SEQ; Genomic_DNA.
DR RefSeq; XP_015634456.1; XM_015778970.1.
DR AlphaFoldDB; G3XKQ9; -.
DR STRING; 4530.OS04T0396500-00; -.
DR PRIDE; G3XKQ9; -.
DR EnsemblPlants; Os04t0396500-01; Os04t0396500-01; Os04g0396500.
DR GeneID; 107277161; -.
DR Gramene; Os04t0396500-01; Os04t0396500-01; Os04g0396500.
DR KEGG; osa:107277161; -.
DR eggNOG; KOG2660; Eukaryota.
DR HOGENOM; CLU_1392174_0_0_1; -.
DR OrthoDB; 1514024at2759; -.
DR Proteomes; UP000000763; Chromosome 4.
DR Proteomes; UP000059680; Chromosome 4.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:UniProtKB.
DR GO; GO:2000032; P:regulation of secondary shoot formation; IMP:UniProtKB.
DR InterPro; IPR044171; LAX2-like.
DR PANTHER; PTHR47290; PTHR47290; 1.
PE 1: Evidence at protein level;
KW Developmental protein; Nucleus; Reference proteome.
FT CHAIN 1..394
FT /note="Protein LAX PANICLE 2"
FT /id="PRO_0000441776"
FT REGION 1..193
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 21..41
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 54..83
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 85..101
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 118..136
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 167..184
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 394 AA; 42770 MW; 6B94E606E4F7DC00 CRC64;
MVPARSLAHP HPHLVRRRRD HAAAAHGATA RCDDDDDGVV TPRGPTRYMA QEPINHHQHQ
HDPPKQPPPR EADDDHHRIQ EREPLPPPTT TTRNQRLQLQ LGGDGHHNHH HHHHQEVAGT
SGSSSGGSSS NNGGGGTRDW LRLATGPASP GASAGSDHDL FPSTTTTAPA PQPPTPTPTP
TPTPTPRHHH HDVLVLPGMP PPGSFLRPGP AMPGIPQASI PTHMLRAAPP WLPPWSPVAA
PPPLLPFPHQ HRAFYAAPPT TTPPASSGFD AIRVVLPPSA VAAAAGVWFV LQAAPLQGRE
PFLPQIPRSY LRIKDGRVTV RLLTKYLVNK LGLEDESEVE ITCRGRQLLP ILTLQHVRDS
IWCRRDAVSP SAAPDIPTAD HHQHIMVLQY GRRP
