ID   LBD17_ARATH             Reviewed;         244 AA.
AC   Q9SLB6; B7XG69; Q8S9M2;
DT   28-MAR-2003, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-2000, sequence version 1.
DT   03-AUG-2022, entry version 108.
DE   RecName: Full=LOB domain-containing protein 17;
DE   AltName: Full=ASYMMETRIC LEAVES 2-like protein 15;
DE            Short=AS2-like protein 15;
GN   Name=LBD17; Synonyms=ASL15; OrderedLocusNames=At2g42440; ORFNames=MHK10.16;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=19154202; DOI=10.1111/j.1365-313x.2009.03797.x;
RA   Matsumura Y., Iwakawa H., Machida Y., Machida C.;
RT   "Characterization of genes in the ASYMMETRIC LEAVES2/LATERAL ORGAN
RT   BOUNDARIES (AS2/LOB) family in Arabidopsis thaliana, and functional and
RT   molecular comparisons between AS2 and other family members.";
RL   Plant J. 58:525-537(2009).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617197; DOI=10.1038/45471;
RA   Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA   Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA   Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA   Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA   Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA   Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA   Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT   "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL   Nature 402:761-768(1999).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 13-244.
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA   Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA   Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA   Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA   Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA   Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA   Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA   Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA   Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA   Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA   Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA   Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
RN   [5]
RP   TISSUE SPECIFICITY, GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=12068116; DOI=10.1104/pp.010926;
RA   Shuai B., Reynaga-Pena C.G., Springer P.S.;
RT   "The LATERAL ORGAN BOUNDARIES gene defines a novel, plant-specific gene
RT   family.";
RL   Plant Physiol. 129:747-761(2002).
RN   [6]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=12040093; DOI=10.1093/pcp/pcf077;
RA   Iwakawa H., Ueno Y., Semiarti E., Onouchi H., Kojima S., Tsukaya H.,
RA   Hasebe M., Soma T., Ikezaki M., Machida C., Machida Y.;
RT   "The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for
RT   formation of a symmetric flat leaf lamina, encodes a member of a novel
RT   family of proteins characterized by cysteine repeats and a leucine
RT   zipper.";
RL   Plant Cell Physiol. 43:467-478(2002).
RN   [7]
RP   INDUCTION BY AUXIN.
RX   PubMed=15659631; DOI=10.1105/tpc.104.028316;
RA   Okushima Y., Overvoorde P.J., Arima K., Alonso J.M., Chan A., Chang C.,
RA   Ecker J.R., Hughes B., Lui A., Nguyen D., Onodera C., Quach H., Smith A.,
RA   Yu G., Theologis A.;
RT   "Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family
RT   members in Arabidopsis thaliana: unique and overlapping functions of ARF7
RT   and ARF19.";
RL   Plant Cell 17:444-463(2005).
CC   -!- TISSUE SPECIFICITY: Expressed in roots, stems, leaves and flowers.
CC       {ECO:0000269|PubMed:12068116}.
CC   -!- INDUCTION: By auxin. {ECO:0000269|PubMed:15659631}.
CC   -!- SIMILARITY: Belongs to the LOB domain-containing protein family.
CC       {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAL69467.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR   EMBL; AB473848; BAH10559.1; -; mRNA.
DR   EMBL; AC005956; AAD23726.1; -; Genomic_DNA.
DR   EMBL; CP002685; AEC10120.1; -; Genomic_DNA.
DR   EMBL; AY074651; AAL69467.1; ALT_INIT; mRNA.
DR   PIR; H84853; H84853.
DR   RefSeq; NP_850370.4; NM_180039.5.
DR   AlphaFoldDB; Q9SLB6; -.
DR   SMR; Q9SLB6; -.
DR   STRING; 3702.AT2G42440.1; -.
DR   PaxDb; Q9SLB6; -.
DR   PRIDE; Q9SLB6; -.
DR   EnsemblPlants; AT2G42440.1; AT2G42440.1; AT2G42440.
DR   GeneID; 818844; -.
DR   Gramene; AT2G42440.1; AT2G42440.1; AT2G42440.
DR   KEGG; ath:AT2G42440; -.
DR   Araport; AT2G42440; -.
DR   TAIR; locus:2053813; AT2G42440.
DR   eggNOG; ENOG502QUV3; Eukaryota.
DR   HOGENOM; CLU_058353_3_1_1; -.
DR   InParanoid; Q9SLB6; -.
DR   OMA; NIMTSCY; -.
DR   OrthoDB; 1335565at2759; -.
DR   PhylomeDB; Q9SLB6; -.
DR   PRO; PR:Q9SLB6; -.
DR   Proteomes; UP000006548; Chromosome 2.
DR   ExpressionAtlas; Q9SLB6; baseline and differential.
DR   Genevisible; Q9SLB6; AT.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:1990110; P:callus formation; IMP:TAIR.
DR   GO; GO:0009755; P:hormone-mediated signaling pathway; IBA:GO_Central.
DR   GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IBA:GO_Central.
DR   InterPro; IPR004883; LOB.
DR   Pfam; PF03195; LOB; 1.
DR   PROSITE; PS50891; LOB; 1.
PE   2: Evidence at transcript level;
KW   Reference proteome.
FT   CHAIN           1..244
FT                   /note="LOB domain-containing protein 17"
FT                   /id="PRO_0000132268"
FT   DOMAIN          6..108
FT                   /note="LOB"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00291"
SQ   SEQUENCE   244 AA;  27387 MW;  1361B310AC261954 CRC64;
     MTGSGSPCGA CKFLRRRCVK GCVFAPYFCH EQGASHFAAI HQVFGASNAS KLLSHLPMED
     RREAATTIYY EAQARRQDPI YGCVSHIFSL QQQVVNLQTQ LEILKQQATQ SMMAIDSPSI
     ENPNYYQDTK PQYLQESHDL HHHHLTTSNC QTEQNSDLKN IMTSCYHQME IETTPFTGAG
     GDTMAGSYYY NSSSGCSEEL KSVSTNGEFS KYSELDQHLT NTFNQYRHGG NNLISESLGY
     ITYS