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LBD1_ARATH
ID   LBD1_ARATH              Reviewed;         190 AA.
AC   Q9LQR0; B7XG62;
DT   28-MAR-2003, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   03-AUG-2022, entry version 94.
DE   RecName: Full=LOB domain-containing protein 1;
DE   AltName: Full=ASYMMETRIC LEAVES 2-like protein 8;
DE            Short=AS2-like protein 8;
GN   Name=LBD1; Synonyms=ASL8; OrderedLocusNames=At1g07900; ORFNames=F24B9.1;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=19154202; DOI=10.1111/j.1365-313x.2009.03797.x;
RA   Matsumura Y., Iwakawa H., Machida Y., Machida C.;
RT   "Characterization of genes in the ASYMMETRIC LEAVES2/LATERAL ORGAN
RT   BOUNDARIES (AS2/LOB) family in Arabidopsis thaliana, and functional and
RT   molecular comparisons between AS2 and other family members.";
RL   Plant J. 58:525-537(2009).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [4]
RP   TISSUE SPECIFICITY, GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=12068116; DOI=10.1104/pp.010926;
RA   Shuai B., Reynaga-Pena C.G., Springer P.S.;
RT   "The LATERAL ORGAN BOUNDARIES gene defines a novel, plant-specific gene
RT   family.";
RL   Plant Physiol. 129:747-761(2002).
RN   [5]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=12040093; DOI=10.1093/pcp/pcf077;
RA   Iwakawa H., Ueno Y., Semiarti E., Onouchi H., Kojima S., Tsukaya H.,
RA   Hasebe M., Soma T., Ikezaki M., Machida C., Machida Y.;
RT   "The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for
RT   formation of a symmetric flat leaf lamina, encodes a member of a novel
RT   family of proteins characterized by cysteine repeats and a leucine
RT   zipper.";
RL   Plant Cell Physiol. 43:467-478(2002).
CC   -!- TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and
CC       flowers. {ECO:0000269|PubMed:12068116}.
CC   -!- SIMILARITY: Belongs to the LOB domain-containing protein family.
CC       {ECO:0000305}.
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DR   EMBL; AB473841; BAH10552.1; -; mRNA.
DR   EMBL; AC007583; AAF75065.1; -; Genomic_DNA.
DR   EMBL; CP002684; AEE28208.1; -; Genomic_DNA.
DR   PIR; E86214; E86214.
DR   RefSeq; NP_172268.1; NM_100664.5.
DR   AlphaFoldDB; Q9LQR0; -.
DR   SMR; Q9LQR0; -.
DR   BioGRID; 22546; 2.
DR   STRING; 3702.AT1G07900.1; -.
DR   PaxDb; Q9LQR0; -.
DR   PRIDE; Q9LQR0; -.
DR   ProteomicsDB; 237151; -.
DR   EnsemblPlants; AT1G07900.1; AT1G07900.1; AT1G07900.
DR   GeneID; 837305; -.
DR   Gramene; AT1G07900.1; AT1G07900.1; AT1G07900.
DR   KEGG; ath:AT1G07900; -.
DR   Araport; AT1G07900; -.
DR   TAIR; locus:2026611; AT1G07900.
DR   eggNOG; ENOG502QV36; Eukaryota.
DR   HOGENOM; CLU_058353_4_0_1; -.
DR   InParanoid; Q9LQR0; -.
DR   OMA; NSSMLWW; -.
DR   OrthoDB; 1419561at2759; -.
DR   PhylomeDB; Q9LQR0; -.
DR   PRO; PR:Q9LQR0; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; Q9LQR0; baseline and differential.
DR   GO; GO:0005739; C:mitochondrion; HDA:TAIR.
DR   InterPro; IPR004883; LOB.
DR   Pfam; PF03195; LOB; 1.
DR   PROSITE; PS50891; LOB; 1.
PE   2: Evidence at transcript level;
KW   Reference proteome.
FT   CHAIN           1..190
FT                   /note="LOB domain-containing protein 1"
FT                   /id="PRO_0000132252"
FT   DOMAIN          32..133
FT                   /note="LOB"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00291"
FT   REGION          1..27
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..25
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   190 AA;  21410 MW;  91F1D38E48C724A6 CRC64;
     MESKSDASVA TTPIISSSSS PPPSLSPRVV LSPCAACKIL RRRCAERCVL APYFPPTDPA
     KFTIAHRVFG ASNIIKFLQE LPESQRTDAV NSMVYEAEAR IRDPVYGCAG AIYHLQRQVS
     ELQAQLAKAQ VEMVNMQFQR SNLLELIYNM DQQQKQEQDN MSFESNDLGF LEDKSNTNSS
     MLWWDPLWTC
 
 
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