LBD27_ARATH
ID LBD27_ARATH Reviewed; 328 AA.
AC Q9STS6; B7XG83;
DT 28-MAR-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=LOB domain-containing protein 27;
DE AltName: Full=ASYMMETRIC LEAVES 2-like protein 29;
DE Short=AS2-like protein 29;
GN Name=LBD27; Synonyms=ASL29; OrderedLocusNames=At3g47870;
GN ORFNames=T23J7.200;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=19154202; DOI=10.1111/j.1365-313x.2009.03797.x;
RA Matsumura Y., Iwakawa H., Machida Y., Machida C.;
RT "Characterization of genes in the ASYMMETRIC LEAVES2/LATERAL ORGAN
RT BOUNDARIES (AS2/LOB) family in Arabidopsis thaliana, and functional and
RT molecular comparisons between AS2 and other family members.";
RL Plant J. 58:525-537(2009).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=12068116; DOI=10.1104/pp.010926;
RA Shuai B., Reynaga-Pena C.G., Springer P.S.;
RT "The LATERAL ORGAN BOUNDARIES gene defines a novel, plant-specific gene
RT family.";
RL Plant Physiol. 129:747-761(2002).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=12040093; DOI=10.1093/pcp/pcf077;
RA Iwakawa H., Ueno Y., Semiarti E., Onouchi H., Kojima S., Tsukaya H.,
RA Hasebe M., Soma T., Ikezaki M., Machida C., Machida Y.;
RT "The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for
RT formation of a symmetric flat leaf lamina, encodes a member of a novel
RT family of proteins characterized by cysteine repeats and a leucine
RT zipper.";
RL Plant Cell Physiol. 43:467-478(2002).
CC -!- INTERACTION:
CC Q9STS6; Q39237: TGA1; NbExp=3; IntAct=EBI-15209584, EBI-541351;
CC -!- SIMILARITY: Belongs to the LOB domain-containing protein family.
CC {ECO:0000305}.
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DR EMBL; AB473862; BAH10573.1; -; mRNA.
DR EMBL; AL049746; CAB41870.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE78342.1; -; Genomic_DNA.
DR PIR; T07726; T07726.
DR RefSeq; NP_190371.1; NM_114657.6.
DR AlphaFoldDB; Q9STS6; -.
DR SMR; Q9STS6; -.
DR BioGRID; 9263; 13.
DR IntAct; Q9STS6; 8.
DR STRING; 3702.AT3G47870.1; -.
DR PaxDb; Q9STS6; -.
DR PRIDE; Q9STS6; -.
DR EnsemblPlants; AT3G47870.1; AT3G47870.1; AT3G47870.
DR GeneID; 823943; -.
DR Gramene; AT3G47870.1; AT3G47870.1; AT3G47870.
DR KEGG; ath:AT3G47870; -.
DR Araport; AT3G47870; -.
DR TAIR; locus:2100332; AT3G47870.
DR eggNOG; ENOG502QTUX; Eukaryota.
DR HOGENOM; CLU_073711_1_0_1; -.
DR InParanoid; Q9STS6; -.
DR OMA; MSHEIGE; -.
DR OrthoDB; 1090873at2759; -.
DR PhylomeDB; Q9STS6; -.
DR PRO; PR:Q9STS6; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9STS6; baseline and differential.
DR GO; GO:0005634; C:nucleus; IDA:TAIR.
DR GO; GO:0009556; P:microsporogenesis; IMP:TAIR.
DR GO; GO:0009555; P:pollen development; IMP:TAIR.
DR GO; GO:0009786; P:regulation of asymmetric cell division; IMP:TAIR.
DR InterPro; IPR004883; LOB.
DR Pfam; PF03195; LOB; 1.
DR PROSITE; PS50891; LOB; 1.
PE 1: Evidence at protein level;
KW Reference proteome.
FT CHAIN 1..328
FT /note="LOB domain-containing protein 27"
FT /id="PRO_0000132278"
FT DOMAIN 35..136
FT /note="LOB"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00291"
SQ SEQUENCE 328 AA; 37334 MW; 3DC982C9806C1D3D CRC64;
MSNTKHIHKG LQERLLDLLL IALIVYMTLK GGTSGACAAC KYQRRRCAAD CPLAPYFPAE
QPKLFQNVHR LFGVRSIVKI LEKLDETQKP EAMKSIIFQS YVRDRSPVHG CLGVTQQLQY
MIWFAEEELK AVNSQLQLYR SQPQNGQNQN QNHNHNQMIH ELGSDHNKQQ EDVTSQQLDL
GMGLNVNNNQ SNVVTPFFSS LLPVSETQQP QMSYTYSCSE VNNNGYSPPA YNTDSGKEIL
TNNNNVWGDQ NRFLYNNNNG GGYSNQNESC HEMKSNGVMA IQSQLVNLQM VSNHQRVEEE
EADHEYDELH QFLDIIDDRQ SFGDSKEA
