LBD33_ARATH
ID LBD33_ARATH Reviewed; 177 AA.
AC Q9LHS8; B7XG78;
DT 28-MAR-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=LOB domain-containing protein 33;
DE AltName: Full=ASYMMETRIC LEAVES 2-like protein 24;
DE Short=AS2-like protein 24;
GN Name=LBD33; Synonyms=ASL24; OrderedLocusNames=At5g06080; ORFNames=K16F4.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=19154202; DOI=10.1111/j.1365-313x.2009.03797.x;
RA Matsumura Y., Iwakawa H., Machida Y., Machida C.;
RT "Characterization of genes in the ASYMMETRIC LEAVES2/LATERAL ORGAN
RT BOUNDARIES (AS2/LOB) family in Arabidopsis thaliana, and functional and
RT molecular comparisons between AS2 and other family members.";
RL Plant J. 58:525-537(2009).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (MAY-2000) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP TISSUE SPECIFICITY, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=12068116; DOI=10.1104/pp.010926;
RA Shuai B., Reynaga-Pena C.G., Springer P.S.;
RT "The LATERAL ORGAN BOUNDARIES gene defines a novel, plant-specific gene
RT family.";
RL Plant Physiol. 129:747-761(2002).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=12040093; DOI=10.1093/pcp/pcf077;
RA Iwakawa H., Ueno Y., Semiarti E., Onouchi H., Kojima S., Tsukaya H.,
RA Hasebe M., Soma T., Ikezaki M., Machida C., Machida Y.;
RT "The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for
RT formation of a symmetric flat leaf lamina, encodes a member of a novel
RT family of proteins characterized by cysteine repeats and a leucine
RT zipper.";
RL Plant Cell Physiol. 43:467-478(2002).
RN [6]
RP INDUCTION BY AUXIN.
RX PubMed=17259263; DOI=10.1105/tpc.106.047761;
RA Okushima Y., Fukaki H., Onoda M., Theologis A., Tasaka M.;
RT "ARF7 and ARF19 regulate lateral root formation via direct activation of
RT LBD/ASL genes in Arabidopsis.";
RL Plant Cell 19:118-130(2007).
CC -!- TISSUE SPECIFICITY: Expressed in roots. {ECO:0000269|PubMed:12068116}.
CC -!- INDUCTION: By auxin. {ECO:0000269|PubMed:17259263}.
CC -!- SIMILARITY: Belongs to the LOB domain-containing protein family.
CC {ECO:0000305}.
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DR EMBL; AB473857; BAH10568.1; -; mRNA.
DR EMBL; AP002030; BAA98197.1; -; Genomic_DNA.
DR EMBL; CP002688; AED90962.1; -; Genomic_DNA.
DR RefSeq; NP_196226.1; NM_120690.5.
DR AlphaFoldDB; Q9LHS8; -.
DR SMR; Q9LHS8; -.
DR STRING; 3702.AT5G06080.1; -.
DR PaxDb; Q9LHS8; -.
DR PRIDE; Q9LHS8; -.
DR ProteomicsDB; 237077; -.
DR EnsemblPlants; AT5G06080.1; AT5G06080.1; AT5G06080.
DR GeneID; 830495; -.
DR Gramene; AT5G06080.1; AT5G06080.1; AT5G06080.
DR KEGG; ath:AT5G06080; -.
DR Araport; AT5G06080; -.
DR TAIR; locus:2152820; AT5G06080.
DR eggNOG; ENOG502RYXG; Eukaryota.
DR HOGENOM; CLU_058353_3_2_1; -.
DR InParanoid; Q9LHS8; -.
DR OMA; QNMDYYY; -.
DR OrthoDB; 1225365at2759; -.
DR PhylomeDB; Q9LHS8; -.
DR PRO; PR:Q9LHS8; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LHS8; baseline and differential.
DR Genevisible; Q9LHS8; AT.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0009755; P:hormone-mediated signaling pathway; IBA:GO_Central.
DR GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IBA:GO_Central.
DR InterPro; IPR004883; LOB.
DR Pfam; PF03195; LOB; 1.
DR PROSITE; PS50891; LOB; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..177
FT /note="LOB domain-containing protein 33"
FT /id="PRO_0000132284"
FT DOMAIN 6..108
FT /note="LOB"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00291"
SQ SEQUENCE 177 AA; 20243 MW; B85FECC76A482CF7 CRC64;
MASHGSSCGA CKFLRRKCNR DCVFSPYFSY EQASSHFAAV HKVFGASNVS KHLLHLPQHQ
RNIAAITISY EALSRMRDPV YGCVAHIFAL HQQVVTLQEE IEFLGSQMKN FSYSNQNGSQ
LNNIPEFVNQ MTMATTNFVD ESVLNNADGR NCYDGFFTNS EEMLVNHQWL QNMDYYY
