LBD37_ARATH
ID LBD37_ARATH Reviewed; 250 AA.
AC Q9FN11; B7XG93; Q2HIV4; Q8LA66;
DT 17-JAN-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 97.
DE RecName: Full=LOB domain-containing protein 37;
DE AltName: Full=ASYMMETRIC LEAVES 2-like protein 39;
DE Short=AS2-like protein 39;
GN Name=LBD37; Synonyms=ASL39; OrderedLocusNames=At5g67420; ORFNames=K8K14.16;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, GENE FAMILY, AND
RP NOMENCLATURE.
RC STRAIN=cv. Columbia;
RX PubMed=12068116; DOI=10.1104/pp.010926;
RA Shuai B., Reynaga-Pena C.G., Springer P.S.;
RT "The LATERAL ORGAN BOUNDARIES gene defines a novel, plant-specific gene
RT family.";
RL Plant Physiol. 129:747-761(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=19154202; DOI=10.1111/j.1365-313x.2009.03797.x;
RA Matsumura Y., Iwakawa H., Machida Y., Machida C.;
RT "Characterization of genes in the ASYMMETRIC LEAVES2/LATERAL ORGAN
RT BOUNDARIES (AS2/LOB) family in Arabidopsis thaliana, and functional and
RT molecular comparisons between AS2 and other family members.";
RL Plant J. 58:525-537(2009).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9501997; DOI=10.1093/dnares/4.6.401;
RA Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence
RT features of the regions of 1,191,918 bp covered by seventeen physically
RT assigned P1 clones.";
RL DNA Res. 4:401-414(1997).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Shinn P., Chen H., Kim C.J., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases.
RN [7]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=12040093; DOI=10.1093/pcp/pcf077;
RA Iwakawa H., Ueno Y., Semiarti E., Onouchi H., Kojima S., Tsukaya H.,
RA Hasebe M., Soma T., Ikezaki M., Machida C., Machida Y.;
RT "The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for
RT formation of a symmetric flat leaf lamina, encodes a member of a novel
RT family of proteins characterized by cysteine repeats and a leucine
RT zipper.";
RL Plant Cell Physiol. 43:467-478(2002).
CC -!- TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and
CC flowers. {ECO:0000269|PubMed:12068116}.
CC -!- SIMILARITY: Belongs to the LOB domain-containing protein family.
CC {ECO:0000305}.
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DR EMBL; AF447894; AAL38039.1; -; mRNA.
DR EMBL; AB473872; BAH10583.1; -; mRNA.
DR EMBL; AB007645; BAB09027.1; -; Genomic_DNA.
DR EMBL; CP002688; AED98342.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM69094.1; -; Genomic_DNA.
DR EMBL; AY087998; AAM65544.1; -; mRNA.
DR EMBL; BT024477; ABD19658.1; -; mRNA.
DR RefSeq; NP_001318897.1; NM_001345828.1.
DR RefSeq; NP_201543.1; NM_126142.5.
DR AlphaFoldDB; Q9FN11; -.
DR SMR; Q9FN11; -.
DR BioGRID; 22120; 6.
DR STRING; 3702.AT5G67420.1; -.
DR PaxDb; Q9FN11; -.
DR PRIDE; Q9FN11; -.
DR ProteomicsDB; 237080; -.
DR EnsemblPlants; AT5G67420.1; AT5G67420.1; AT5G67420.
DR EnsemblPlants; AT5G67420.2; AT5G67420.2; AT5G67420.
DR GeneID; 836878; -.
DR Gramene; AT5G67420.1; AT5G67420.1; AT5G67420.
DR Gramene; AT5G67420.2; AT5G67420.2; AT5G67420.
DR KEGG; ath:AT5G67420; -.
DR Araport; AT5G67420; -.
DR TAIR; locus:2158247; AT5G67420.
DR eggNOG; ENOG502QU8T; Eukaryota.
DR HOGENOM; CLU_054665_1_1_1; -.
DR InParanoid; Q9FN11; -.
DR OMA; PNFPIKQ; -.
DR OrthoDB; 1468441at2759; -.
DR PhylomeDB; Q9FN11; -.
DR PRO; PR:Q9FN11; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FN11; baseline and differential.
DR Genevisible; Q9FN11; AT.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR GO; GO:0006807; P:nitrogen compound metabolic process; IMP:TAIR.
DR GO; GO:0010468; P:regulation of gene expression; IBA:GO_Central.
DR GO; GO:0060776; P:simple leaf morphogenesis; IMP:TAIR.
DR InterPro; IPR004883; LOB.
DR Pfam; PF03195; LOB; 1.
DR PROSITE; PS50891; LOB; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..250
FT /note="LOB domain-containing protein 37"
FT /id="PRO_0000132287"
FT DOMAIN 1..107
FT /note="LOB"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00291"
FT REGION 145..227
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 168..182
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 196..227
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 131
FT /note="A -> S (in Ref. 5; AAM65544)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 250 AA; 27113 MW; C1276BF727008A27 CRC64;
MSCNGCRVLR KGCSENCILR PCIQWIETAD AQGHATVFVA KFFGRAGLMS FISAVPDSQR
PALFQSLLYE ACGRTVNPVN GAIGMLWTGN WNICQAAVET VLRGGSLRPI PELLTHGGGF
AGFPSPTSEE ASEICTEMLN LQQNDSTDRN IYHHSRFSSS RSRSTMDSSS PTKRKRLSSE
DQPSSELDLS LIPNFPIKQA TPSSTRRRSV TPSMNSEDSG TTTTTTAFCD KGDVYGNGGG
ETTKLLNLFV
