ID   LBD3_ARATH              Reviewed;         165 AA.
AC   Q9SA51; B7XG63;
DT   28-MAR-2003, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-2000, sequence version 1.
DT   03-AUG-2022, entry version 107.
DE   RecName: Full=LOB domain-containing protein 3;
DE   AltName: Full=ASYMMETRIC LEAVES 2-like protein 9;
DE            Short=AS2-like protein 9;
GN   Name=LBD3; Synonyms=ASL9; OrderedLocusNames=At1g16530; ORFNames=F3O9.33;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=19154202; DOI=10.1111/j.1365-313x.2009.03797.x;
RA   Matsumura Y., Iwakawa H., Machida Y., Machida C.;
RT   "Characterization of genes in the ASYMMETRIC LEAVES2/LATERAL ORGAN
RT   BOUNDARIES (AS2/LOB) family in Arabidopsis thaliana, and functional and
RT   molecular comparisons between AS2 and other family members.";
RL   Plant J. 58:525-537(2009).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [4]
RP   TISSUE SPECIFICITY, GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=12068116; DOI=10.1104/pp.010926;
RA   Shuai B., Reynaga-Pena C.G., Springer P.S.;
RT   "The LATERAL ORGAN BOUNDARIES gene defines a novel, plant-specific gene
RT   family.";
RL   Plant Physiol. 129:747-761(2002).
RN   [5]
RP   INDUCTION BY CYTOKININ, TISSUE SPECIFICITY, AND SUBCELLULAR LOCATION.
RX   PubMed=17485849; DOI=10.1271/bbb.60681;
RA   Naito T., Yamashino T., Kiba T., Koizumi N., Kojima M., Sakakibara H.,
RA   Mizuno T.;
RT   "A link between cytokinin and ASL9 (ASYMMETRIC LEAVES 2 LIKE 9) that
RT   belongs to the AS2/LOB (LATERAL ORGAN BOUNDARIES) family genes in
RT   Arabidopsis thaliana.";
RL   Biosci. Biotechnol. Biochem. 71:1269-1278(2007).
RN   [6]
RP   GENE FAMILY, AND NOMENCLATURE.
RX   PubMed=12040093; DOI=10.1093/pcp/pcf077;
RA   Iwakawa H., Ueno Y., Semiarti E., Onouchi H., Kojima S., Tsukaya H.,
RA   Hasebe M., Soma T., Ikezaki M., Machida C., Machida Y.;
RT   "The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for
RT   formation of a symmetric flat leaf lamina, encodes a member of a novel
RT   family of proteins characterized by cysteine repeats and a leucine
RT   zipper.";
RL   Plant Cell Physiol. 43:467-478(2002).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:17485849}.
CC   -!- TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and
CC       flowers. At the bases of lateral organs formed from vegetative,
CC       inflorescence, and floral meristems. {ECO:0000269|PubMed:12068116,
CC       ECO:0000269|PubMed:17485849}.
CC   -!- INDUCTION: By cytokinin. {ECO:0000269|PubMed:17485849}.
CC   -!- MISCELLANEOUS: Over-expression of LBD3 induces a dwarf phenotype.
CC   -!- SIMILARITY: Belongs to the LOB domain-containing protein family.
CC       {ECO:0000305}.
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DR   EMBL; AB473842; BAH10553.1; -; mRNA.
DR   EMBL; AC006341; AAD34704.1; -; Genomic_DNA.
DR   EMBL; CP002684; AEE29466.1; -; Genomic_DNA.
DR   RefSeq; NP_173102.1; NM_101518.4.
DR   AlphaFoldDB; Q9SA51; -.
DR   SMR; Q9SA51; -.
DR   BioGRID; 23463; 2.
DR   STRING; 3702.AT1G16530.1; -.
DR   PaxDb; Q9SA51; -.
DR   PRIDE; Q9SA51; -.
DR   DNASU; 838223; -.
DR   EnsemblPlants; AT1G16530.1; AT1G16530.1; AT1G16530.
DR   GeneID; 838223; -.
DR   Gramene; AT1G16530.1; AT1G16530.1; AT1G16530.
DR   KEGG; ath:AT1G16530; -.
DR   Araport; AT1G16530; -.
DR   TAIR; locus:2032931; AT1G16530.
DR   eggNOG; ENOG502R4HI; Eukaryota.
DR   HOGENOM; CLU_058353_5_2_1; -.
DR   InParanoid; Q9SA51; -.
DR   OMA; GHDCVFA; -.
DR   OrthoDB; 1352113at2759; -.
DR   PhylomeDB; Q9SA51; -.
DR   PRO; PR:Q9SA51; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; Q9SA51; baseline and differential.
DR   Genevisible; Q9SA51; AT.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0000976; F:transcription cis-regulatory region binding; IPI:TAIR.
DR   InterPro; IPR004883; LOB.
DR   Pfam; PF03195; LOB; 1.
DR   PROSITE; PS50891; LOB; 1.
PE   2: Evidence at transcript level;
KW   Nucleus; Reference proteome.
FT   CHAIN           1..165
FT                   /note="LOB domain-containing protein 3"
FT                   /id="PRO_0000132254"
FT   DOMAIN          13..115
FT                   /note="LOB"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00291"
SQ   SEQUENCE   165 AA;  18637 MW;  0C7FDBD6D304CA98 CRC64;
     MRQKGHRHGR TVSPCAGCKL LRRKCVKDSC VFAPYFPAKE PYKFAIVHKI FGASNVNKML
     QELSENHRSD AVDSMVYEAN ARIQDPVYGC VGTISSLHRQ LETLQTQLAF AQAELIHIRT
     LHRIHTKPPP YTASTVTFPS NKDFYSDIDM AVAYTDDAGD FLWSC