LBD5_ARATH
ID LBD5_ARATH Reviewed; 122 AA.
AC Q9C8V8; B7XG87; Q4PT06;
DT 28-MAR-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 25-MAY-2022, entry version 88.
DE RecName: Full=LOB domain-containing protein 5;
DE AltName: Full=ASYMMETRIC LEAVES 2-like protein 33;
DE Short=AS2-like protein 33;
GN Name=LBD5; Synonyms=ASL33; OrderedLocusNames=At1g36000; ORFNames=T22A15.8;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=19154202; DOI=10.1111/j.1365-313x.2009.03797.x;
RA Matsumura Y., Iwakawa H., Machida Y., Machida C.;
RT "Characterization of genes in the ASYMMETRIC LEAVES2/LATERAL ORGAN
RT BOUNDARIES (AS2/LOB) family in Arabidopsis thaliana, and functional and
RT molecular comparisons between AS2 and other family members.";
RL Plant J. 58:525-537(2009).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=12068116; DOI=10.1104/pp.010926;
RA Shuai B., Reynaga-Pena C.G., Springer P.S.;
RT "The LATERAL ORGAN BOUNDARIES gene defines a novel, plant-specific gene
RT family.";
RL Plant Physiol. 129:747-761(2002).
RN [6]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=12040093; DOI=10.1093/pcp/pcf077;
RA Iwakawa H., Ueno Y., Semiarti E., Onouchi H., Kojima S., Tsukaya H.,
RA Hasebe M., Soma T., Ikezaki M., Machida C., Machida Y.;
RT "The ASYMMETRIC LEAVES2 gene of Arabidopsis thaliana, required for
RT formation of a symmetric flat leaf lamina, encodes a member of a novel
RT family of proteins characterized by cysteine repeats and a leucine
RT zipper.";
RL Plant Cell Physiol. 43:467-478(2002).
CC -!- SIMILARITY: Belongs to the LOB domain-containing protein family.
CC {ECO:0000305}.
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DR EMBL; AB473866; BAH10577.1; -; mRNA.
DR EMBL; AC021666; AAG52312.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE31837.1; -; Genomic_DNA.
DR EMBL; DQ056480; AAY78637.1; -; mRNA.
DR PIR; H86481; H86481.
DR RefSeq; NP_174832.1; NM_103296.4.
DR AlphaFoldDB; Q9C8V8; -.
DR SMR; Q9C8V8; -.
DR STRING; 3702.AT1G36000.1; -.
DR PaxDb; Q9C8V8; -.
DR PRIDE; Q9C8V8; -.
DR EnsemblPlants; AT1G36000.1; AT1G36000.1; AT1G36000.
DR GeneID; 840503; -.
DR Gramene; AT1G36000.1; AT1G36000.1; AT1G36000.
DR KEGG; ath:AT1G36000; -.
DR Araport; AT1G36000; -.
DR TAIR; locus:2199091; AT1G36000.
DR HOGENOM; CLU_058353_8_0_1; -.
DR OMA; CQYESAN; -.
DR OrthoDB; 1524973at2759; -.
DR PhylomeDB; Q9C8V8; -.
DR PRO; PR:Q9C8V8; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9C8V8; baseline and differential.
DR Genevisible; Q9C8V8; AT.
DR InterPro; IPR004883; LOB.
DR Pfam; PF03195; LOB; 1.
DR PROSITE; PS50891; LOB; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..122
FT /note="LOB domain-containing protein 5"
FT /id="PRO_0000132256"
FT DOMAIN 8..109
FT /note="LOB"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00291"
SQ SEQUENCE 122 AA; 14259 MW; 7B417898506C9AF3 CRC64;
MEPLGNRRPC SVCITKNRNC PRFCEYAEYF PYELQSQYES ANELFGTPNI ITMMQHAPEE
KKQMLATSII MEGNAWTEDP ISGGFGMIQK LMWKIMLHKA YLRELQEKIK EEKEKKPASS
LY
