LBD6_MAIZE
ID LBD6_MAIZE Reviewed; 260 AA.
AC Q32SG3;
DT 21-AUG-2007, integrated into UniProtKB/Swiss-Prot.
DT 06-DEC-2005, sequence version 1.
DT 03-AUG-2022, entry version 77.
DE RecName: Full=LOB domain-containing protein 6;
DE AltName: Full=Protein ASYMMETRIC LEAVES 2;
DE AltName: Full=Protein indeterminate gametophyte 1;
DE AltName: Full=ZmIG1;
GN Name=LBD6; Synonyms=AS2, IG1;
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND INTERACTION WITH RS2.
RC TISSUE=Apices;
RX PubMed=16243907; DOI=10.1105/tpc.105.035477;
RA Phelps-Durr T.L., Thomas J., Vahab P., Timmermans M.C.P.;
RT "Maize rough sheath2 and its Arabidopsis orthologue ASYMMETRIC LEAVES1
RT interact with HIRA, a predicted histone chaperone, to maintain knox gene
RT silencing and determinacy during organogenesis.";
RL Plant Cell 17:2886-2898(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], TISSUE SPECIFICITY, DEVELOPMENTAL STAGE,
RP AND FUNCTION.
RC STRAIN=cv. B73;
RX PubMed=17209126; DOI=10.1105/tpc.106.047506;
RA Evans M.M.S.;
RT "The indeterminate gametophyte1 gene of maize encodes a LOB domain protein
RT required for embryo Sac and leaf development.";
RL Plant Cell 19:46-62(2007).
CC -!- FUNCTION: Promotes the switch from proliferation to differentiation in
CC the embryo sac. Negative regulator of cell proliferation in the adaxial
CC side of leaves. Regulates the formation of a symmetric lamina and the
CC establishment of venation. Interacts directly with RS2 (rough sheath 2)
CC to repress some knox homeobox genes. {ECO:0000269|PubMed:17209126}.
CC -!- SUBUNIT: Interacts with RS2. {ECO:0000269|PubMed:16243907}.
CC -!- INTERACTION:
CC Q32SG3; Q9S7B2: RS2; NbExp=2; IntAct=EBI-761239, EBI-761350;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in leaves, leaf primordia, immature ears,
CC immature tassels, whole ovules, silk and husk leaves. Found on the
CC adaxial side of organs. {ECO:0000269|PubMed:17209126}.
CC -!- DEVELOPMENTAL STAGE: In embryo sac, detected as early as the one-
CC nucleus stage. In older embryo sacs, highest expression in antipodal
CC cells. {ECO:0000269|PubMed:17209126}.
CC -!- MISCELLANEOUS: Might be partially redundant with the IAL genes.
CC -!- SIMILARITY: Belongs to the LOB domain-containing protein family.
CC {ECO:0000305}.
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DR EMBL; AY940681; AAY24684.1; -; mRNA.
DR EMBL; EF081454; ABM21683.1; -; Genomic_DNA.
DR RefSeq; NP_001105838.1; NM_001112368.1.
DR RefSeq; XP_008673456.1; XM_008675234.1.
DR AlphaFoldDB; Q32SG3; -.
DR SMR; Q32SG3; -.
DR IntAct; Q32SG3; 1.
DR STRING; 4577.GRMZM2G118250_P06; -.
DR PaxDb; Q32SG3; -.
DR PRIDE; Q32SG3; -.
DR EnsemblPlants; Zm00001eb145150_T001; Zm00001eb145150_P001; Zm00001eb145150.
DR EnsemblPlants; Zm00001eb145150_T003; Zm00001eb145150_P003; Zm00001eb145150.
DR EnsemblPlants; Zm00001eb145150_T005; Zm00001eb145150_P005; Zm00001eb145150.
DR GeneID; 732739; -.
DR Gramene; Zm00001eb145150_T001; Zm00001eb145150_P001; Zm00001eb145150.
DR Gramene; Zm00001eb145150_T003; Zm00001eb145150_P003; Zm00001eb145150.
DR Gramene; Zm00001eb145150_T005; Zm00001eb145150_P005; Zm00001eb145150.
DR KEGG; zma:732739; -.
DR eggNOG; ENOG502QV43; Eukaryota.
DR HOGENOM; CLU_058353_1_2_1; -.
DR OMA; DEWAYVS; -.
DR Proteomes; UP000007305; Chromosome 3.
DR ExpressionAtlas; Q32SG3; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR InterPro; IPR004883; LOB.
DR Pfam; PF03195; LOB; 1.
DR PROSITE; PS50891; LOB; 1.
PE 1: Evidence at protein level;
KW Developmental protein; Nucleus; Reference proteome.
FT CHAIN 1..260
FT /note="LOB domain-containing protein 6"
FT /id="PRO_0000299138"
FT DOMAIN 32..133
FT /note="LOB"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00291"
SQ SEQUENCE 260 AA; 26721 MW; 1ADBFE1EE22D6DDF CRC64;
MASSVPAPSG SVITVASSSS SAAAAAVCGT GSPCAACKFL RRKCQPDCVF APYFPPDNPQ
KFVHVHRVFG ASNVTKLLNE LHPFQREDAV NSLAYEADMR LRDPVYGCVG VISILQHNLR
QLQQDLARAK YELSKYQAAA AASASTAPTG PQAMAEFIGN AMPNGAHNFI NIGHSAALGS
LGGSASVFGQ EQFGNAQMLS RSYDGGEPIA RLGINGGGYE FGYSTAMGGS GAVSGLGTLG
ISPFLKSGTA GGDEKPNGGQ