LBX1_XENLA
ID LBX1_XENLA Reviewed; 267 AA.
AC Q2PYN8;
DT 09-JAN-2007, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Transcription factor LBX1;
DE AltName: Full=Ladybird homeobox protein homolog 1;
GN Name=lbx1 {ECO:0000312|EMBL:ABC49635.1};
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1] {ECO:0000305, ECO:0000312|EMBL:ABC49635.1}
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND TISSUE SPECIFICITY.
RX PubMed=16339190; DOI=10.1242/dev.02183;
RA Martin B.L., Harland R.M.;
RT "A novel role for lbx1 in Xenopus hypaxial myogenesis.";
RL Development 133:195-208(2006).
CC -!- FUNCTION: Transcription factor that controls hypaxial muscle
CC development by down-regulating myod1 and cdkn1b/p27, thereby allowing
CC myoblasts to proliferate before the onset of terminal differentiation.
CC {ECO:0000269|PubMed:16339190}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Expressed in all myoblasts that will populate body
CC wall muscles as well as in a group of cells the migrate into the head.
CC {ECO:0000269|PubMed:16339190}.
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DR EMBL; DQ294722; ABC49635.1; -; mRNA.
DR RefSeq; NP_001089192.1; NM_001095723.1.
DR GeneID; 734237; -.
DR KEGG; xla:734237; -.
DR CTD; 734237; -.
DR Xenbase; XB-GENE-6251676; lbx1.L.
DR OrthoDB; 1472248at2759; -.
DR Proteomes; UP000186698; Chromosome 7L.
DR Bgee; 734237; Expressed in muscle tissue and 3 other tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005667; C:transcription regulator complex; ISS:UniProtKB.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; ISS:UniProtKB.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR GO; GO:0007517; P:muscle organ development; IMP:UniProtKB.
DR GO; GO:0051450; P:myoblast proliferation; IMP:UniProtKB.
DR GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IMP:UniProtKB.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; ISS:UniProtKB.
DR CDD; cd00086; homeodomain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR000047; HTH_motif.
DR Pfam; PF00046; Homeodomain; 1.
DR PRINTS; PR00031; HTHREPRESSR.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 2: Evidence at transcript level;
KW Developmental protein; Differentiation; DNA-binding; Homeobox; Myogenesis;
KW Nucleus; Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..267
FT /note="Transcription factor LBX1"
FT /id="PRO_0000271250"
FT DNA_BIND 127..186
FT /note="Homeobox"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00108"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 208..267
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..22
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 222..249
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 267 AA; 29596 MW; C8D9927F4F6FAAA3 CRC64;
MTSKDEAKSS ASSVEERRRN ALDLLPPPAN SNKPLTPFSI EDILNKPSVR RSYTICGTAH
LLSSADKPPA AGLPLSSRAL LSQTSPLCAL EELASKTFKG LEVSVLQAAE GRDGMTIFGQ
RQTPKKRRKS RTAFTNHQIY ELEKRFLYQK YLSPADRDQI AQQLGLTNAQ VITWFQNRRA
KLKRDLEEMK ADVESTKKMS PSAVEAVLTI SELEESGSER GNSRSRSPQL GLTSNHMPLS
PSXPLTDQHA SKECSEDEED VEIDVDD