LCA5L_BOVIN
ID LCA5L_BOVIN Reviewed; 670 AA.
AC A7E3D8;
DT 29-APR-2008, integrated into UniProtKB/Swiss-Prot.
DT 29-APR-2008, sequence version 2.
DT 03-AUG-2022, entry version 66.
DE RecName: Full=Lebercilin-like protein;
DE AltName: Full=Leber congenital amaurosis 5-like protein;
GN Name=LCA5L {ECO:0000250|UniProtKB:O95447};
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae;
OC Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hereford;
RX PubMed=19390049; DOI=10.1126/science.1169588;
RG The bovine genome sequencing and analysis consortium;
RT "The genome sequence of taurine cattle: a window to ruminant biology and
RT evolution.";
RL Science 324:522-528(2009).
RN [2] {ECO:0000305, ECO:0000312|EMBL:AAI51816.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-401.
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the LCA5 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAI51816.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305};
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DR EMBL; AAFC03010727; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC151815; AAI51816.1; ALT_SEQ; mRNA.
DR RefSeq; NP_001181997.1; NM_001195068.1.
DR AlphaFoldDB; A7E3D8; -.
DR SMR; A7E3D8; -.
DR STRING; 9913.ENSBTAP00000054161; -.
DR PaxDb; A7E3D8; -.
DR PRIDE; A7E3D8; -.
DR Ensembl; ENSBTAT00000064834; ENSBTAP00000054161; ENSBTAG00000030993.
DR GeneID; 781766; -.
DR KEGG; bta:781766; -.
DR CTD; 150082; -.
DR VEuPathDB; HostDB:ENSBTAG00000030993; -.
DR VGNC; VGNC:30808; LCA5L.
DR eggNOG; ENOG502QQSE; Eukaryota.
DR GeneTree; ENSGT00560000077266; -.
DR HOGENOM; CLU_026861_0_0_1; -.
DR InParanoid; A7E3D8; -.
DR OMA; QIMVKHQ; -.
DR OrthoDB; 461316at2759; -.
DR TreeFam; TF323306; -.
DR Proteomes; UP000009136; Chromosome 1.
DR Bgee; ENSBTAG00000030993; Expressed in spermatid and 25 other tissues.
DR GO; GO:0005930; C:axoneme; IBA:GO_Central.
DR GO; GO:0042073; P:intraciliary transport; IBA:GO_Central.
DR InterPro; IPR026188; Lebercilin-like.
DR InterPro; IPR028933; Lebercilin_dom.
DR PANTHER; PTHR16650; PTHR16650; 1.
DR Pfam; PF15619; Lebercilin; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Reference proteome.
FT CHAIN 1..670
FT /note="Lebercilin-like protein"
FT /id="PRO_0000331227"
FT REGION 1..63
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 373..399
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 413..453
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 145..335
FT /evidence="ECO:0000255"
FT COILED 418..468
FT /evidence="ECO:0000255"
FT COMPBIAS 20..63
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 418..438
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 670 AA; 76371 MW; 43B7EFEA1C3077C5 CRC64;
MSLAGPTETN LGGHFPGTAV ENGGSSSKRE SSSPGFPRNS NASDKSVDYS RSRCSCRSPS
SHYDYSEDFL SACSETTARN NYLEKPTVKE KKEKKKYNVS KISQLKGQKE ISVRKKHSWN
VPFLNSQISV AAQRRDAMIH RILSARLHKI KELKNELADL HHKAEATVIE NQFLKQVQLK
HLKAIGKYEN SQNNLPQIMA KHQNEVKNLR QLLRKSQGKE RATSRKLREM DGELLRTKDA
LQALQKISEE NNLPEREELT QRLSILTAKM EANDKKIQDL EKQLRLNNKA FTRQLTFENR
KTLAAQAATK TLQMEIKHLQ QKLKEKDREL EIRNIYSNRI VGNLHDKEDY PKVSSTKSVQ
ADRRSFPFIS MRHQETQKSE DVASWTTKSK KTTGNNGHKE KSIEIIHAMP PCITKLPNQE
DSKRKYEDLS KEEQHLEAQP SLKNTGQQRY RTENQEKKIT LVKEEQELPP KRIEVIHPEG
EGGQEDDTEK YKFKRSPEIS DMGDMPDKNA APHIKIPFRQ RKHYSFTEAI ENLHHGLPAS
GGLANAGSTR YPHSTGKHHS HSEEMKLEHP AIAYEPSFAK SYRTKAKDTT FREKKSNLME
ELFGSDYVLK NNQTSTTVMK EPEETLQSTK IHHLPPSQAS ASNAFGDSGV TVVNSIKSSS
PTEGNRKIII