LCDH_PSEU2
ID LCDH_PSEU2 Reviewed; 318 AA.
AC Q4ZSC0;
DT 13-JUN-2012, integrated into UniProtKB/Swiss-Prot.
DT 07-JUN-2005, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=L-carnitine dehydrogenase {ECO:0000255|HAMAP-Rule:MF_02129};
DE Short=CDH {ECO:0000255|HAMAP-Rule:MF_02129};
DE Short=L-CDH {ECO:0000255|HAMAP-Rule:MF_02129};
DE EC=1.1.1.108 {ECO:0000255|HAMAP-Rule:MF_02129};
GN Name=lcdH {ECO:0000255|HAMAP-Rule:MF_02129}; OrderedLocusNames=Psyr_2918;
OS Pseudomonas syringae pv. syringae (strain B728a).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.
OX NCBI_TaxID=205918;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=B728a;
RX PubMed=16043691; DOI=10.1073/pnas.0504930102;
RA Feil H., Feil W.S., Chain P., Larimer F., Dibartolo G., Copeland A.,
RA Lykidis A., Trong S., Nolan M., Goltsman E., Thiel J., Malfatti S.,
RA Loper J.E., Lapidus A., Detter J.C., Land M., Richardson P.M.,
RA Kyrpides N.C., Ivanova N., Lindow S.E.;
RT "Comparison of the complete genome sequences of Pseudomonas syringae pv.
RT syringae B728a and pv. tomato DC3000.";
RL Proc. Natl. Acad. Sci. U.S.A. 102:11064-11069(2005).
CC -!- FUNCTION: Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3-
CC dehydrocarnitine. {ECO:0000255|HAMAP-Rule:MF_02129}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=carnitine + NAD(+) = 3-dehydrocarnitine + H(+) + NADH;
CC Xref=Rhea:RHEA:19265, ChEBI:CHEBI:15378, ChEBI:CHEBI:17126,
CC ChEBI:CHEBI:57540, ChEBI:CHEBI:57885, ChEBI:CHEBI:57945;
CC EC=1.1.1.108; Evidence={ECO:0000255|HAMAP-Rule:MF_02129};
CC -!- PATHWAY: Amine and polyamine metabolism; carnitine metabolism.
CC {ECO:0000255|HAMAP-Rule:MF_02129}.
CC -!- SUBUNIT: Homodimer. {ECO:0000255|HAMAP-Rule:MF_02129}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02129}.
CC -!- SIMILARITY: Belongs to the 3-hydroxyacyl-CoA dehydrogenase family. L-
CC carnitine dehydrogenase subfamily. {ECO:0000255|HAMAP-Rule:MF_02129}.
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DR EMBL; CP000075; AAY37952.1; -; Genomic_DNA.
DR RefSeq; WP_011268084.1; NC_007005.1.
DR RefSeq; YP_235990.1; NC_007005.1.
DR AlphaFoldDB; Q4ZSC0; -.
DR SMR; Q4ZSC0; -.
DR STRING; 205918.Psyr_2918; -.
DR EnsemblBacteria; AAY37952; AAY37952; Psyr_2918.
DR KEGG; psb:Psyr_2918; -.
DR PATRIC; fig|205918.7.peg.2977; -.
DR eggNOG; COG1250; Bacteria.
DR HOGENOM; CLU_009834_0_1_6; -.
DR OMA; KREIQGF; -.
DR UniPathway; UPA00117; -.
DR Proteomes; UP000000426; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0047728; F:carnitine 3-dehydrogenase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0070403; F:NAD+ binding; IEA:InterPro.
DR GO; GO:0042413; P:carnitine catabolic process; IEA:UniProtKB-UniRule.
DR GO; GO:0006631; P:fatty acid metabolic process; IEA:InterPro.
DR Gene3D; 1.10.1040.10; -; 1.
DR HAMAP; MF_02129; L_carnitine_dehydrog; 1.
DR InterPro; IPR006176; 3-OHacyl-CoA_DH_NAD-bd.
DR InterPro; IPR006108; 3HC_DH_C.
DR InterPro; IPR008927; 6-PGluconate_DH-like_C_sf.
DR InterPro; IPR013328; 6PGD_dom2.
DR InterPro; IPR026578; L-carnitine_dehydrogenase.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR Pfam; PF00725; 3HCDH; 1.
DR Pfam; PF02737; 3HCDH_N; 1.
DR SUPFAM; SSF48179; SSF48179; 1.
DR SUPFAM; SSF51735; SSF51735; 1.
PE 3: Inferred from homology;
KW Cytoplasm; NAD; Oxidoreductase.
FT CHAIN 1..318
FT /note="L-carnitine dehydrogenase"
FT /id="PRO_0000417903"
FT BINDING 14..19
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02129"
SQ SEQUENCE 318 AA; 34339 MW; 1A993171E5EAC8E7 CRC64;
MSFITEIKTF AALGSGVIGS GWVSRALAHG LDVVAWDPAP GAEAALRNRV AKCWGALEQQ
GLVPGASQNR LRFVATVEEC VRDADFIQES APERLELKLD LHSRISAAAR SNVLIGSSTS
GLLPSDVYES SAHPERCVVG HPFNPVYLLP LVEVVGGKNT APAAIQAAIK VYESLGMRPL
HVRKEVPGFI ADRLLEALWR EALHLVNDGV ATTGEIDDAI RFGAGLRWSF MGTFLTYTLA
GGEAGMRHFM TQFGPALQLP WTYLPAPELT DKLIDDVVDG TTDQLGKHSI SGLERYRDDC
LLAVLEAVKT TKARHGMA