LCDH_STRGG
ID LCDH_STRGG Reviewed; 335 AA.
AC B1VLT7;
DT 13-JUN-2012, integrated into UniProtKB/Swiss-Prot.
DT 20-MAY-2008, sequence version 1.
DT 03-AUG-2022, entry version 79.
DE RecName: Full=L-carnitine dehydrogenase {ECO:0000255|HAMAP-Rule:MF_02129};
DE Short=CDH {ECO:0000255|HAMAP-Rule:MF_02129};
DE Short=L-CDH {ECO:0000255|HAMAP-Rule:MF_02129};
DE EC=1.1.1.108 {ECO:0000255|HAMAP-Rule:MF_02129};
GN Name=lcdH {ECO:0000255|HAMAP-Rule:MF_02129}; OrderedLocusNames=SGR_6649;
OS Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350).
OC Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
OC Streptomyces.
OX NCBI_TaxID=455632;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 4626 / NBRC 13350;
RX PubMed=18375553; DOI=10.1128/jb.00204-08;
RA Ohnishi Y., Ishikawa J., Hara H., Suzuki H., Ikenoya M., Ikeda H.,
RA Yamashita A., Hattori M., Horinouchi S.;
RT "Genome sequence of the streptomycin-producing microorganism Streptomyces
RT griseus IFO 13350.";
RL J. Bacteriol. 190:4050-4060(2008).
CC -!- FUNCTION: Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3-
CC dehydrocarnitine. {ECO:0000255|HAMAP-Rule:MF_02129}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=carnitine + NAD(+) = 3-dehydrocarnitine + H(+) + NADH;
CC Xref=Rhea:RHEA:19265, ChEBI:CHEBI:15378, ChEBI:CHEBI:17126,
CC ChEBI:CHEBI:57540, ChEBI:CHEBI:57885, ChEBI:CHEBI:57945;
CC EC=1.1.1.108; Evidence={ECO:0000255|HAMAP-Rule:MF_02129};
CC -!- PATHWAY: Amine and polyamine metabolism; carnitine metabolism.
CC {ECO:0000255|HAMAP-Rule:MF_02129}.
CC -!- SUBUNIT: Homodimer. {ECO:0000255|HAMAP-Rule:MF_02129}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02129}.
CC -!- SIMILARITY: Belongs to the 3-hydroxyacyl-CoA dehydrogenase family. L-
CC carnitine dehydrogenase subfamily. {ECO:0000255|HAMAP-Rule:MF_02129}.
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DR EMBL; AP009493; BAG23478.1; -; Genomic_DNA.
DR RefSeq; WP_012382098.1; NC_010572.1.
DR AlphaFoldDB; B1VLT7; -.
DR SMR; B1VLT7; -.
DR STRING; 455632.SGR_6649; -.
DR EnsemblBacteria; BAG23478; BAG23478; SGR_6649.
DR GeneID; 6212030; -.
DR KEGG; sgr:SGR_6649; -.
DR PATRIC; fig|455632.4.peg.6824; -.
DR eggNOG; COG1250; Bacteria.
DR HOGENOM; CLU_009834_0_1_11; -.
DR OMA; VIGMGWA; -.
DR OrthoDB; 862072at2; -.
DR UniPathway; UPA00117; -.
DR Proteomes; UP000001685; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0047728; F:carnitine 3-dehydrogenase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0070403; F:NAD+ binding; IEA:InterPro.
DR GO; GO:0042413; P:carnitine catabolic process; IEA:UniProtKB-UniRule.
DR GO; GO:0006631; P:fatty acid metabolic process; IEA:InterPro.
DR Gene3D; 1.10.1040.10; -; 1.
DR HAMAP; MF_02129; L_carnitine_dehydrog; 1.
DR InterPro; IPR006176; 3-OHacyl-CoA_DH_NAD-bd.
DR InterPro; IPR006108; 3HC_DH_C.
DR InterPro; IPR008927; 6-PGluconate_DH-like_C_sf.
DR InterPro; IPR013328; 6PGD_dom2.
DR InterPro; IPR026578; L-carnitine_dehydrogenase.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR Pfam; PF00725; 3HCDH; 1.
DR Pfam; PF02737; 3HCDH_N; 1.
DR SUPFAM; SSF48179; SSF48179; 1.
DR SUPFAM; SSF51735; SSF51735; 1.
PE 3: Inferred from homology;
KW Cytoplasm; NAD; Oxidoreductase.
FT CHAIN 1..335
FT /note="L-carnitine dehydrogenase"
FT /id="PRO_0000417910"
FT BINDING 29..34
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02129"
SQ SEQUENCE 335 AA; 35227 MW; AF9E3A335B17E339 CRC64;
MTVTPSAATT DGPAAPCAPE DVRRVACVGT GVIGGGWAAH FLARGYDVTA WDPAPDAAVR
LRRLIAAAWP ALEQLGLAEG ASQDRLTVTS TLEEAVADAQ FVQESAPEKL DLKRDLLARL
DAATPAGTVI ASSTSGYPMT DMQTEAADPG RLVVGHPFNP PYLIPLVEVV GGVRTAPAAV
DWAARFYAVA GKSVITMERE VPGFIANRLQ EALWREALHM VANGEATVAE IDASITEGPG
LRWAVMGPML TFALAGGEGG MAHMLDHFGP SLTSPWTRLE APELDRALYD AVVAGCEEAA
DGRSIADLVA ERDRGVIDVL RATGRLPRSA EEAAR