LCRD_YERE8
ID LCRD_YERE8 Reviewed; 704 AA.
AC A1JU76; O68548; P21210; Q84GT4; Q93KU1;
DT 01-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 06-FEB-2007, sequence version 1.
DT 25-MAY-2022, entry version 75.
DE RecName: Full=Low calcium response locus protein D;
GN Name=lcrD; OrderedLocusNames=YEP0018;
OS Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 /
OS 8081).
OG Plasmid pYVe8081.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Yersinia.
OX NCBI_TaxID=393305;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=11402007; DOI=10.1128/iai.69.7.4627-4638.2001;
RA Snellings N.J., Popek M., Lindler L.E.;
RT "Complete DNA sequence of Yersinia enterocolitica serotype 0:8 low-calcium-
RT response plasmid reveals a new virulence plasmid-associated replicon.";
RL Infect. Immun. 69:4627-4638(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCTC 13174 / 8081;
RX PubMed=17173484; DOI=10.1371/journal.pgen.0020206;
RA Thomson N.R., Howard S., Wren B.W., Holden M.T.G., Crossman L.,
RA Challis G.L., Churcher C., Mungall K., Brooks K., Chillingworth T.,
RA Feltwell T., Abdellah Z., Hauser H., Jagels K., Maddison M., Moule S.,
RA Sanders M., Whitehead S., Quail M.A., Dougan G., Parkhill J.,
RA Prentice M.B.;
RT "The complete genome sequence and comparative genome analysis of the high
RT pathogenicity Yersinia enterocolitica strain 8081.";
RL PLoS Genet. 2:2039-2051(2006).
CC -!- FUNCTION: Could be involved in the secretion of the yop virulence
CC proteins. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000250}; Multi-pass
CC membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the FHIPEP (flagella/HR/invasion proteins export
CC pore) family. {ECO:0000305}.
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DR EMBL; AF336309; AAK69216.1; -; Genomic_DNA.
DR EMBL; AM286416; CAL10042.1; -; Genomic_DNA.
DR RefSeq; NP_863517.1; NC_005017.1.
DR RefSeq; WP_011117635.1; NC_008791.1.
DR RefSeq; YP_001004072.1; NC_008791.1.
DR AlphaFoldDB; A1JU76; -.
DR SMR; A1JU76; -.
DR STRING; 393305.YEP0018; -.
DR EnsemblBacteria; CAL10042; CAL10042; YEP0018.
DR KEGG; yen:YEP0018; -.
DR PATRIC; fig|393305.7.peg.21; -.
DR eggNOG; COG4789; Bacteria.
DR HOGENOM; CLU_015346_3_0_6; -.
DR OMA; PQFIGLQ; -.
DR PRO; PR:A1JU76; -.
DR Proteomes; UP000000642; Plasmid pYVe8081.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0009306; P:protein secretion; IEA:InterPro.
DR Gene3D; 1.10.8.540; -; 1.
DR Gene3D; 3.40.30.60; -; 1.
DR Gene3D; 3.40.50.12790; -; 1.
DR InterPro; IPR042194; FHIPEP_1.
DR InterPro; IPR042193; FHIPEP_3.
DR InterPro; IPR042196; FHIPEP_4.
DR InterPro; IPR025505; FHIPEP_CS.
DR InterPro; IPR001712; T3SS_FHIPEP.
DR InterPro; IPR006302; T3SS_HrcV.
DR PANTHER; PTHR30161; PTHR30161; 1.
DR Pfam; PF00771; FHIPEP; 1.
DR PIRSF; PIRSF005419; FlhA; 1.
DR PRINTS; PR00949; TYPE3IMAPROT.
DR TIGRFAMs; TIGR01399; hrcV; 1.
DR PROSITE; PS00994; FHIPEP; 1.
PE 3: Inferred from homology;
KW Cell inner membrane; Cell membrane; Membrane; Plasmid; Protein transport;
KW Transmembrane; Transmembrane helix; Transport; Virulence.
FT CHAIN 1..704
FT /note="Low calcium response locus protein D"
FT /id="PRO_0000285827"
FT TRANSMEM 20..40
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 42..62
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 67..87
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 112..132
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 200..220
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 238..258
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 290..310
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 704 AA; 77844 MW; B9F748F50B664A85 CRC64;
MNPYDLEWLN RIGERKDIML AVLLLAVVFM MVLPLPPLVL DILIAVNMTI SVVLLMIAIY
INSPLQFSAF PAVLLVTTLF RLALSVSTTR MILLQADAGQ IVYTFGNFVV GGNLIVGIVI
FLIITIVQFL VITKGSERVA EVSARFSLDA MPGKQMSIDG DMRAGVIDVN EARERRATIE
KESQMFGSMD GAMKFVKGDA IAGLIIIFVN ILGGVTIGVT QKGLAAAEAL QLYSILTVGD
GMVSQVPALL IAITAGIIVT RVSSEDSSDL GSDIGKQVVA QPKAMLIGGV LLLLFGLIPG
FPTVTFLILA LLVGCGGYML SRKQSRNDEA NQDLQSLLTS GSGAPAARTK AKTSGANKGR
LGEQEAFAMT VPLLIDVDSS QQEALEAIAL NDELVRVRRA LYLDLGVPFP GIHLRFNEGM
GEGEYLISLQ EVPVARGELK AGYLLVRESV SQLELLGIPY EKGEHLLPDQ ETFWVSVEYE
ERLEKSQLEF FSHSQVLTWH LSHVLREYAE DFIGIQETRY LLEQMEGGYG ELIKEVQRIV
PLQRMTEILQ RLVGEDISIR NMRSILEAMV EWGQKEKDVV QLTEYIRSSL KRYICYKYAN
GNNILPAYLF DQEVEEKIRS AVRQTSAGSY LALDPAVTES LLEQVRKTIG DLSQIQSKPV
LIVSMDIRRY VRKLIESEYY GLPVLSYQEL TQQINIQPLG RVCL