LCRD_YEREN
ID LCRD_YEREN Reviewed; 704 AA.
AC P0C2V3; O68548; P21210; Q84GT4; Q93KU1;
DT 01-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2007, sequence version 1.
DT 25-MAY-2022, entry version 52.
DE RecName: Full=Low calcium response locus protein D;
GN Name=lcrD;
OS Yersinia enterocolitica.
OG Plasmid pYV, Plasmid pYVe227, and Plasmid pYVa127/90.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Yersinia.
OX NCBI_TaxID=630;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC 51871 / WA-314 / Serotype O:8; PLASMID=pYV;
RA Roggemkamp A.;
RL Submitted (AUG-1992) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=W22703 / Serotype O:9 / Biotype 2; PLASMID=pYVe227;
RA Iriarte M., Lambermont I., Kerbourch C., Cornelis G.R.;
RT "Detailed genetic map of the pYVe227 plasmid of Yersinia enterocolitica
RT serotype O:9.";
RL Submitted (OCT-1998) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=A127/90 / Serotype O:8 / Biotype 1B; PLASMID=pYVa127/90;
RX PubMed=14527656; DOI=10.1016/s0923-2508(03)00147-5;
RA Foultier B., Cornelis G.R.;
RT "DNA sequence and analysis of the pYVa127/90 virulence plasmid of Yersinia
RT enterocolitica strain A127/90.";
RL Res. Microbiol. 154:553-557(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-159.
RC STRAIN=Serotype O:3; PLASMID=pYV;
RX PubMed=2160939; DOI=10.1128/jb.172.6.3152-3162.1990;
RA Viitanen A.-M., Toivanen P., Skurnik M.;
RT "The lcrE gene is part of an operon in the lcr region of Yersinia
RT enterocolitica O:3.";
RL J. Bacteriol. 172:3152-3162(1990).
CC -!- FUNCTION: Could be involved in the secretion of the yop virulence
CC proteins.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
CC -!- SIMILARITY: Belongs to the FHIPEP (flagella/HR/invasion proteins export
CC pore) family. {ECO:0000305}.
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DR EMBL; X67771; CAA47985.1; -; Genomic_DNA.
DR EMBL; AF102990; AAD16818.1; -; Genomic_DNA.
DR EMBL; AY150843; AAN37522.1; -; Genomic_DNA.
DR EMBL; M32097; AAA98433.1; -; Genomic_DNA.
DR PIR; S25586; S25586.
DR RefSeq; NP_783668.1; NC_004564.1.
DR RefSeq; WP_011100753.1; NZ_NWMR01000033.1.
DR PDB; 7ALW; EM; 3.70 A; A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R=1-704.
DR PDBsum; 7ALW; -.
DR AlphaFoldDB; P0C2V3; -.
DR SMR; P0C2V3; -.
DR TCDB; 3.A.6.1.1; the type iii (virulence-related) secretory pathway (iiisp) family.
DR OrthoDB; 436367at2; -.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0009306; P:protein secretion; IEA:InterPro.
DR Gene3D; 1.10.8.540; -; 1.
DR Gene3D; 3.40.30.60; -; 1.
DR Gene3D; 3.40.50.12790; -; 1.
DR InterPro; IPR042194; FHIPEP_1.
DR InterPro; IPR042193; FHIPEP_3.
DR InterPro; IPR042196; FHIPEP_4.
DR InterPro; IPR025505; FHIPEP_CS.
DR InterPro; IPR001712; T3SS_FHIPEP.
DR InterPro; IPR006302; T3SS_HrcV.
DR PANTHER; PTHR30161; PTHR30161; 1.
DR Pfam; PF00771; FHIPEP; 1.
DR PIRSF; PIRSF005419; FlhA; 1.
DR PRINTS; PR00949; TYPE3IMAPROT.
DR TIGRFAMs; TIGR01399; hrcV; 1.
DR PROSITE; PS00994; FHIPEP; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Cell inner membrane; Cell membrane; Membrane; Plasmid;
KW Protein transport; Transmembrane; Transmembrane helix; Transport;
KW Virulence.
FT CHAIN 1..704
FT /note="Low calcium response locus protein D"
FT /id="PRO_0000190029"
FT TRANSMEM 20..40
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 42..62
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 67..87
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 112..132
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 200..220
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 238..258
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 290..310
FT /note="Helical"
FT /evidence="ECO:0000255"
FT VARIANT 114
FT /note="F -> L (in plasmid pYVe227 and plasmid pYVa127/90)"
FT VARIANT 337
FT /note="L -> I (in plasmid pYVe227)"
FT VARIANT 621
FT /note="G -> R (in plasmid pYVe227)"
SQ SEQUENCE 704 AA; 77838 MW; C5B3733BF510B216 CRC64;
MNPHDLEWLN RIGERKDIML AVLLLAVVFM MVLPLPPLVL DILIAVNMTI SVVLLMIAIY
INSPLQFSAF PAVLLVTTLF RLALSVSTTR MILLQADAGQ IVYTFGNFVV GGNFIVGIVI
FLIITIVQFL VITKGSERVA EVSARFSLDA MPGKQMSIDG DMRAGVIDVN EARERRATIE
KESQMFGSMD GAMKFVKGDA IAGLIIIFVN ILGGVTIGVT QKGLAAAEAL QLYSILTVGD
GMVSQVPALL IAITAGIIVT RVSSEDSSDL GSDIGKQVVA QPKAMLIGGV LLLLFGLIPG
FPTVTFLILA LLVGCGGYML SRKQSRNDEA NQDLQSLLTS GSGAPAARTK AKTSGANKGR
LGEQEAFAMT VPLLIDVDSS QQEALEAIAL NDELVRVRRA LYLDLGVPFP GIHLRFNEGM
GEGEYLISLQ EVPVARGELK AGYLLVRESV SQLELLGIPY EKGEHLLPDQ ETFWVSVEYE
ERLEKSQLEF FSHSQVLTWH LSHVLREYAE DFIGIQETRY LLEQMEGGYG ELIKEVQRIV
PLQRMTEILQ RLVGEDISIR NMRSILEAMV EWGQKEKDVV QLTEYIRSSL KRYICYKYAN
GNNILPAYLF DQEVEEKIRS GVRQTSAGSY LALDPAVTES LLEQVRKTIG DLSQIQSKPV
LIVSMDIRRY VRKLIESEYY GLPVLSYQEL TQQINIQPLG RVCL