LCRD_YERPS
ID LCRD_YERPS Reviewed; 704 AA.
AC P69956; P31487; Q56976; Q663K6;
DT 04-JAN-2005, integrated into UniProtKB/Swiss-Prot.
DT 04-JAN-2005, sequence version 1.
DT 25-MAY-2022, entry version 84.
DE RecName: Full=Low calcium response locus protein D;
GN Name=lcrD; OrderedLocusNames=pYV0060;
OS Yersinia pseudotuberculosis serotype I (strain IP32953).
OG Plasmid pIB1, and Plasmid pYV.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Yersiniaceae; Yersinia.
OX NCBI_TaxID=273123;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=YPIII / Serotype O:3; PLASMID=pIB1;
RA Bergman T., Forsberg A., Backman A., Wolf-Watz H.;
RT "The LcrD protein of Yersinia pseudotuberculosis belongs to a novel protein
RT family involved in surface presentation of virulence determinants.";
RL Submitted (NOV-1992) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IP32953; PLASMID=pYV;
RX PubMed=15358858; DOI=10.1073/pnas.0404012101;
RA Chain P.S.G., Carniel E., Larimer F.W., Lamerdin J., Stoutland P.O.,
RA Regala W.M., Georgescu A.M., Vergez L.M., Land M.L., Motin V.L.,
RA Brubaker R.R., Fowler J., Hinnebusch J., Marceau M., Medigue C.,
RA Simonet M., Chenal-Francisque V., Souza B., Dacheux D., Elliott J.M.,
RA Derbise A., Hauser L.J., Garcia E.;
RT "Insights into the evolution of Yersinia pestis through whole-genome
RT comparison with Yersinia pseudotuberculosis.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:13826-13831(2004).
CC -!- FUNCTION: Could be involved in the secretion of the yop virulence
CC proteins.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
CC -!- SIMILARITY: Belongs to the FHIPEP (flagella/HR/invasion proteins export
CC pore) family. {ECO:0000305}.
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DR EMBL; M96850; AAA27647.1; -; Genomic_DNA.
DR EMBL; BX936399; CAF25403.1; -; Genomic_DNA.
DR RefSeq; WP_002212971.1; NZ_CP009711.1.
DR AlphaFoldDB; P69956; -.
DR SMR; P69956; -.
DR EnsemblBacteria; CAF25403; CAF25403; pYV0060.
DR GeneID; 66841114; -.
DR KEGG; ypo:BZ17_4273; -.
DR KEGG; yps:pYV0060; -.
DR PATRIC; fig|273123.14.peg.4509; -.
DR OMA; PQFIGLQ; -.
DR Proteomes; UP000001011; Plasmid pYV.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0009306; P:protein secretion; IEA:InterPro.
DR Gene3D; 1.10.8.540; -; 1.
DR Gene3D; 3.40.30.60; -; 1.
DR Gene3D; 3.40.50.12790; -; 1.
DR InterPro; IPR042194; FHIPEP_1.
DR InterPro; IPR042193; FHIPEP_3.
DR InterPro; IPR042196; FHIPEP_4.
DR InterPro; IPR025505; FHIPEP_CS.
DR InterPro; IPR001712; T3SS_FHIPEP.
DR InterPro; IPR006302; T3SS_HrcV.
DR PANTHER; PTHR30161; PTHR30161; 1.
DR Pfam; PF00771; FHIPEP; 1.
DR PIRSF; PIRSF005419; FlhA; 1.
DR PRINTS; PR00949; TYPE3IMAPROT.
DR TIGRFAMs; TIGR01399; hrcV; 1.
DR PROSITE; PS00994; FHIPEP; 1.
PE 3: Inferred from homology;
KW Cell inner membrane; Cell membrane; Membrane; Plasmid; Protein transport;
KW Transmembrane; Transmembrane helix; Transport; Virulence.
FT CHAIN 1..704
FT /note="Low calcium response locus protein D"
FT /id="PRO_0000190031"
FT TRANSMEM 18..35
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 42..61
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 108..132
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 200..220
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 235..259
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 278..297
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 304..320
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 704 AA; 77802 MW; 21B25E2486910B56 CRC64;
MNPHDLEWLN RIGERKDIML AVLLLAVVFM MVLPLPPLVL DILIAVNMTI SVVLLMIAIY
INSPLQFSAF PAVLLVTTLF RLALSVSTTR MILLQADAGQ IVYTFGNFVV GGNLIVGIVI
FLIITIVQFL VITKGSERVA EVSARFSLDA MPGKQMSIDG DMRAGVIDVN EARERRATIE
KESQMFGSMD GAMKFVKGDA IAGLIIIFVN ILGGVTIGVT QKGLAAAEAL QLYSILTVGD
GMVSQVPALL IAITAGIIVT RVSSEDSSDL GSDIGKQVVA QPKAMLIGGV LLLLFGLIPG
FPTVTFLILA LLVGCGGYML SRKQSRNDEA NQDLQSILTS GSGAPAARTK AKTSGANKGR
LGEQEAFAMT VPLLIDVDSS QQEALEAIAL NDELVRVRRA LYLDLGVPFP GIHLRFNEGM
GEGEYIISLQ EVPVARGELK AGYLLVRESV SQLELLGIPY EKGEHLLPDQ EAFWVSVEYE
ERLEKSQLEF FSHSQVLTWH LSHVLREYAE DFIGIQETRY LLEQMEGGYG ELIKEVQRIV
PLQRMTEILQ RLVGEDISIR NMRSILEAMV EWGQKEKDVV QLTEYIRSSL KRYICYKYAN
GNNILPAYLF DQEVEEKIRS GVRQTSAGSY LALEPAVTES LLEQVRKTIG DLSQIQSKPV
LIVSMDIRRY VRKLIESEYY GLPVLSYQEL TQQINIQPLG RICL