LDHBB_DANRE
ID LDHBB_DANRE Reviewed; 334 AA.
AC Q6DGK2;
DT 30-NOV-2010, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 128.
DE RecName: Full=L-lactate dehydrogenase B-B chain {ECO:0000250|UniProtKB:P07195};
DE Short=LDH-B-B {ECO:0000250|UniProtKB:P07195};
DE EC=1.1.1.27;
GN Name=ldhbb {ECO:0000312|ZFIN:ZDB-GENE-040718-176}; ORFNames=zgc:92882;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1] {ECO:0000312|EMBL:AAH76340.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain {ECO:0000312|EMBL:AAH76340.1};
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(S)-lactate + NAD(+) = H(+) + NADH + pyruvate;
CC Xref=Rhea:RHEA:23444, ChEBI:CHEBI:15361, ChEBI:CHEBI:15378,
CC ChEBI:CHEBI:16651, ChEBI:CHEBI:57540, ChEBI:CHEBI:57945; EC=1.1.1.27;
CC Evidence={ECO:0000250|UniProtKB:P07195};
CC -!- PATHWAY: Fermentation; pyruvate fermentation to lactate; (S)-lactate
CC from pyruvate: step 1/1. {ECO:0000250|UniProtKB:P07195}.
CC -!- SUBUNIT: Homotetramer. {ECO:0000250|UniProtKB:P07195}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:P07195}.
CC -!- SIMILARITY: Belongs to the LDH/MDH superfamily. LDH family.
CC {ECO:0000255}.
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DR EMBL; BC076340; AAH76340.1; -; mRNA.
DR RefSeq; NP_001002474.1; NM_001002474.1.
DR RefSeq; XP_005170716.1; XM_005170659.2.
DR AlphaFoldDB; Q6DGK2; -.
DR SMR; Q6DGK2; -.
DR STRING; 7955.ENSDARP00000106067; -.
DR Ensembl; ENSDART00000104866; ENSDARP00000095636; ENSDARG00000071076.
DR Ensembl; ENSDART00000181143; ENSDARP00000154861; ENSDARG00000071076.
DR GeneID; 436747; -.
DR KEGG; dre:436747; -.
DR CTD; 436747; -.
DR ZFIN; ZDB-GENE-040718-176; ldhbb.
DR eggNOG; KOG1495; Eukaryota.
DR GeneTree; ENSGT00940000153525; -.
DR InParanoid; Q6DGK2; -.
DR OMA; CYIIVLT; -.
DR OrthoDB; 1204514at2759; -.
DR PhylomeDB; Q6DGK2; -.
DR UniPathway; UPA00554; UER00611.
DR PRO; PR:Q6DGK2; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Chromosome 25.
DR Bgee; ENSDARG00000071076; Expressed in liver and 18 other tissues.
DR ExpressionAtlas; Q6DGK2; baseline and differential.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004459; F:L-lactate dehydrogenase activity; IBA:GO_Central.
DR GO; GO:0019752; P:carboxylic acid metabolic process; IEA:InterPro.
DR Gene3D; 3.90.110.10; -; 1.
DR HAMAP; MF_00488; Lactate_dehydrog; 1.
DR InterPro; IPR001557; L-lactate/malate_DH.
DR InterPro; IPR011304; L-lactate_DH.
DR InterPro; IPR018177; L-lactate_DH_AS.
DR InterPro; IPR022383; Lactate/malate_DH_C.
DR InterPro; IPR001236; Lactate/malate_DH_N.
DR InterPro; IPR015955; Lactate_DH/Glyco_Ohase_4_C.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR Pfam; PF02866; Ldh_1_C; 1.
DR Pfam; PF00056; Ldh_1_N; 1.
DR PIRSF; PIRSF000102; Lac_mal_DH; 1.
DR PRINTS; PR00086; LLDHDRGNASE.
DR SUPFAM; SSF51735; SSF51735; 1.
DR SUPFAM; SSF56327; SSF56327; 1.
DR TIGRFAMs; TIGR01771; L-LDH-NAD; 1.
DR PROSITE; PS00064; L_LDH; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; NAD; Oxidoreductase; Reference proteome.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250|UniProtKB:P07195"
FT CHAIN 2..334
FT /note="L-lactate dehydrogenase B-B chain"
FT /evidence="ECO:0000250|UniProtKB:P07195"
FT /id="PRO_0000401128"
FT ACT_SITE 194
FT /note="Proton acceptor"
FT /evidence="ECO:0000250|UniProtKB:P07195"
FT BINDING 30..58
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250|UniProtKB:P00341"
FT BINDING 100
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250|UniProtKB:P07195"
FT BINDING 107
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:P07195"
FT BINDING 139
FT /ligand="NAD(+)"
FT /ligand_id="ChEBI:CHEBI:57540"
FT /evidence="ECO:0000250|UniProtKB:P07195"
FT BINDING 139
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:P07195"
FT BINDING 170
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:P07195"
FT BINDING 249
FT /ligand="substrate"
FT /evidence="ECO:0000250|UniProtKB:P07195"
SQ SEQUENCE 334 AA; 36710 MW; 86D014E974F98541 CRC64;
MASVLQKLIT PLFSGPLEPP RNKVTVVGVG QVGMACAVSV LLRELADELA LVDVVEDKLK
GEMMDLQHGS LFLKTPKIVS GKDYSVTANS RIVVVTAGVR QQEGESRLNL VQRNVNIFKH
IIPQIVKYSP NCILIVVSNP VDVLTYVTWK LSGLPKHRVI GSGTNLDSAR FRYLMAERLG
IHPSSFNGWI LGEHGDSSVP VWSGANVAGV SLQKLNPDIG KDTDRENWKE THKKVVDSAY
EVIRLKGYTN WAIGLSVADL TESIMKNLNR VHPVSTMVKG MYGISDEVYL SLPCVLNSAG
VGSVVNMTLT VDEVSQLKKS ADMLWHIQRD LRDL