LEA14_ORYSJ
ID LEA14_ORYSJ Reviewed; 215 AA.
AC Q94JF2; Q40709;
DT 20-DEC-2017, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 120.
DE RecName: Full=Late embryogenesis abundant protein 14 {ECO:0000303|Ref.9};
DE Short=OsLEA14 {ECO:0000303|Ref.9};
DE AltName: Full=Protein WATER STRESS-INDUCED 18 {ECO:0000303|PubMed:7948880};
GN Name=LEA14 {ECO:0000303|Ref.9};
GN Synonyms=WSI18 {ECO:0000303|PubMed:7948880};
GN OrderedLocusNames=Os01g0705200 {ECO:0000312|EMBL:BAF05922.1},
GN LOC_Os01g50910 {ECO:0000305};
GN ORFNames=OsJ_03178 {ECO:0000312|EMBL:EAZ13254.1},
GN P0684B02.22 {ECO:0000312|EMBL:BAB44029.1},
GN P0692C11.3 {ECO:0000312|EMBL:BAB86507.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND INDUCTION.
RC STRAIN=cv. Somewake;
RX PubMed=7948880; DOI=10.1007/bf00039544;
RA Takahashi R., Joshee N., Kitagawa Y.;
RT "Induction of chilling resistance by water stress, and cDNA sequence
RT analysis and expression of water stress-regulated genes in rice.";
RL Plant Mol. Biol. 26:339-352(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12447438; DOI=10.1038/nature01184;
RA Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.,
RA Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M.,
RA Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T.,
RA Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S.,
RA Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H.,
RA Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y.,
RA Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S.,
RA Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y.,
RA Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S.,
RA Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H.,
RA Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.;
RT "The genome sequence and structure of rice chromosome 1.";
RL Nature 420:312-316(2002).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [7]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [8]
RP INDUCTION.
RX PubMed=9517002; DOI=10.1093/oxfordjournals.pcp.a029290;
RA Joshee N., Kisaka H., Kitagawa Y.;
RT "Isolation and characterization of a water stress-specific genomic gene,
RT pwsi 18, from rice.";
RL Plant Cell Physiol. 39:64-72(1998).
RN [9]
RP GENE FAMILY, AND NOMENCLATURE.
RX DOI=10.1016/j.plantsci.2006.10.004;
RA Wang X.S., Zhu H.B., Jin G.L., Liu H.L., Wu W.R., Zhu J.;
RT "Genome-scale identification and analysis of LEA genes in rice (Oryza
RT sativa L.).";
RL Plant Sci. 172:414-420(2007).
RN [10]
RP SUBCELLULAR LOCATION, AND TISSUE SPECIFICITY.
RX PubMed=18315698; DOI=10.1111/j.1469-8137.2007.02365.x;
RA Shobbar Z.S., Oane R., Gamuyao R., De Palma J., Malboobi M.A.,
RA Karimzadeh G., Javaran M.J., Bennett J.;
RT "Abscisic acid regulates gene expression in cortical fiber cells and silica
RT cells of rice shoots.";
RL New Phytol. 178:68-79(2008).
RN [11]
RP TISSUE SPECIFICITY, AND INDUCTION.
RX PubMed=20490919; DOI=10.1007/s11248-010-9400-y;
RA Yi N., Oh S.J., Kim Y.S., Jang H.J., Park S.H., Jeong J.S., Song S.I.,
RA Choi Y.D., Kim J.K.;
RT "Analysis of the Wsi18, a stress-inducible promoter that is active in the
RT whole grain of transgenic rice.";
RL Transgenic Res. 20:153-163(2011).
RN [12]
RP INDUCTION.
RX PubMed=23397192; DOI=10.1007/s00425-013-1853-9;
RA Fukumoto T., Kano A., Ohtani K., Inoue M., Yoshihara A., Izumori K.,
RA Tajima S., Shigematsu Y., Tanaka K., Ohkouchi T., Ishida Y., Nishizawa Y.,
RA Tada Y., Ichimura K., Gomi K., Yoo S.D., Sheen J., Akimitsu K.;
RT "Phosphorylation of D-allose by hexokinase involved in regulation of OsABF1
RT expression for growth inhibition in Oryza sativa L.";
RL Planta 237:1379-1391(2013).
RN [13]
RP TISSUE SPECIFICITY, AND INDUCTION.
RX PubMed=24062085; DOI=10.1007/s00425-013-1960-7;
RA Nakashima K., Jan A., Todaka D., Maruyama K., Goto S., Shinozaki K.,
RA Yamaguchi-Shinozaki K.;
RT "Comparative functional analysis of six drought-responsive promoters in
RT transgenic rice.";
RL Planta 239:47-60(2014).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:18315698}.
CC -!- TISSUE SPECIFICITY: Expressed in the shoot apex and leaves
CC (PubMed:18315698). Expressed in dry seeds (PubMed:20490919). Expressed
CC in roots and leaves (PubMed:24062085). {ECO:0000269|PubMed:18315698,
CC ECO:0000269|PubMed:20490919, ECO:0000269|PubMed:24062085}.
CC -!- INDUCTION: Induced by chilling and mannitol (PubMed:7948880,
CC PubMed:9517002). Induced by drought stress (PubMed:9517002,
CC PubMed:20490919, PubMed:24062085). Induced by salt stress
CC (PubMed:9517002, PubMed:20490919, PubMed:24062085). Induced by abscisic
CC acid (ABA) (PubMed:20490919, PubMed:24062085). Induced by D-allose and
CC D-glucose (PubMed:23397192). {ECO:0000269|PubMed:20490919,
CC ECO:0000269|PubMed:23397192, ECO:0000269|PubMed:24062085,
CC ECO:0000269|PubMed:7948880, ECO:0000269|PubMed:9517002}.
CC -!- SIMILARITY: Belongs to the LEA type 4 family. {ECO:0000305}.
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DR EMBL; D26536; BAA05537.1; -; mRNA.
DR EMBL; AP003023; BAB44029.1; -; Genomic_DNA.
DR EMBL; AP003381; BAB86507.1; -; Genomic_DNA.
DR EMBL; AP008207; BAF05922.1; -; Genomic_DNA.
DR EMBL; AP014957; BAS73926.1; -; Genomic_DNA.
DR EMBL; CM000138; EAZ13254.1; -; Genomic_DNA.
DR EMBL; AK064074; BAG88998.1; -; mRNA.
DR PIR; S52642; S52642.
DR RefSeq; XP_015613488.1; XM_015758002.1.
DR AlphaFoldDB; Q94JF2; -.
DR SMR; Q94JF2; -.
DR STRING; 4530.OS01T0705200-01; -.
DR PaxDb; Q94JF2; -.
DR PRIDE; Q94JF2; -.
DR EnsemblPlants; Os01t0705200-01; Os01t0705200-01; Os01g0705200.
DR GeneID; 4324254; -.
DR Gramene; Os01t0705200-01; Os01t0705200-01; Os01g0705200.
DR KEGG; osa:4324254; -.
DR eggNOG; KOG4744; Eukaryota.
DR HOGENOM; CLU_100093_1_0_1; -.
DR InParanoid; Q94JF2; -.
DR OMA; QEQASYH; -.
DR OrthoDB; 1531155at2759; -.
DR Proteomes; UP000000763; Chromosome 1.
DR Proteomes; UP000007752; Chromosome 1.
DR Proteomes; UP000059680; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome.
FT CHAIN 1..215
FT /note="Late embryogenesis abundant protein 14"
FT /id="PRO_0000442721"
FT REGION 1..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 190..215
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 11..42
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 53..86
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 94..116
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 94
FT /note="Missing (in Ref. 1; BAA05537)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 215 AA; 22132 MW; 2EACAD613A60AAC1 CRC64;
MASQQERASY HAGETKARAE EKTGRMMGTA QEKAREAKDT ASDAAGRAMG RGHGAKEATK
EKAYETKDAT KEKAYEAKDA ASDATGRAMD KGRGAAGATR DKAYDAKDRA ADTAQSAADR
ARDGAGQTGS YIGQTAEAAK QKAAGAAQYA KETAIAGKDK TGAVLQQAGE QVKSVAVGAK
DAVMYTLGMS GDNKNNAAAG KDTSTYKPGT GSDYQ
