LEA17_ORYSJ
ID LEA17_ORYSJ Reviewed; 344 AA.
AC A3AHG5; K4F957; P83196; Q10M52;
DT 24-JUL-2007, integrated into UniProtKB/Swiss-Prot.
DT 20-MAR-2007, sequence version 1.
DT 03-AUG-2022, entry version 67.
DE RecName: Full=Late embryogenesis abundant protein 17 {ECO:0000305};
DE Short=OsLEA17 {ECO:0000303|Ref.7};
DE AltName: Full=Late embryogenesis abundant protein 1 {ECO:0000305};
DE AltName: Full=OsLEA3-2 {ECO:0000303|PubMed:23024799};
GN Name=LEA17 {ECO:0000303|Ref.7};
GN Synonyms=LEA1 {ECO:0000305}, LEA3-2 {ECO:0000303|PubMed:23024799};
GN OrderedLocusNames=Os03g0322900 {ECO:0000312|EMBL:BAS83958.1},
GN LOC_Os03g20680 {ECO:0000312|EMBL:ABF95684.1};
GN ORFNames=OsJ_010237 {ECO:0000312|EMBL:EAZ26754.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, SUBCELLULAR LOCATION, TISSUE
RP SPECIFICITY, AND INDUCTION.
RC STRAIN=cv. Zhonghua 11;
RX PubMed=23024799; DOI=10.1371/journal.pone.0045117;
RA Duan J., Cai W.;
RT "OsLEA3-2, an abiotic stress induced gene of rice plays a key role in salt
RT and drought tolerance.";
RL PLoS ONE 7:E45117-E45117(2012).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [7]
RP GENE FAMILY, AND NOMENCLATURE.
RX DOI=10.1016/j.plantsci.2006.10.004;
RA Wang X.S., Zhu H.B., Jin G.L., Liu H.L., Wu W.R., Zhu J.;
RT "Genome-scale identification and analysis of LEA genes in rice (Oryza
RT sativa L.).";
RL Plant Sci. 172:414-420(2007).
CC -!- FUNCTION: Involved in abiotic stress responses. May function as
CC chaperone and contribute to prevent the formation of damaging protein
CC aggregates. {ECO:0000269|PubMed:23024799}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:23024799}.
CC -!- TISSUE SPECIFICITY: Expressed in embryos.
CC {ECO:0000269|PubMed:23024799}.
CC -!- INDUCTION: Induced by abscisic acid (ABA), salt stress and dehydration.
CC {ECO:0000269|PubMed:23024799}.
CC -!- MISCELLANEOUS: Plants overexpressing LEA17 display enhanced tolerance
CC to salt stress, drought stress and osmotic shock.
CC {ECO:0000269|PubMed:23024799}.
CC -!- SIMILARITY: Belongs to the LEA type 4 family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAF11884.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; JQ043381; AEY11352.1; -; mRNA.
DR EMBL; DP000009; ABF95684.1; -; Genomic_DNA.
DR EMBL; AP008209; BAF11884.2; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014959; BAS83958.1; -; Genomic_DNA.
DR EMBL; CM000140; EAZ26754.1; -; Genomic_DNA.
DR RefSeq; XP_015629108.1; XM_015773622.1.
DR AlphaFoldDB; A3AHG5; -.
DR SMR; A3AHG5; -.
DR STRING; 4530.OS03T0322900-00; -.
DR iPTMnet; A3AHG5; -.
DR PaxDb; A3AHG5; -.
DR PRIDE; A3AHG5; -.
DR EnsemblPlants; Os03t0322900-01; Os03t0322900-01; Os03g0322900.
DR GeneID; 4332688; -.
DR Gramene; Os03t0322900-01; Os03t0322900-01; Os03g0322900.
DR KEGG; osa:4332688; -.
DR eggNOG; ENOG502R2QW; Eukaryota.
DR HOGENOM; CLU_072697_0_0_1; -.
DR InParanoid; A3AHG5; -.
DR OMA; CAHRHGK; -.
DR OrthoDB; 1277972at2759; -.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000007752; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR GO; GO:0005634; C:nucleus; IDA:CACAO.
DR GO; GO:1901002; P:positive regulation of response to salt stress; IMP:UniProtKB.
DR GO; GO:1902584; P:positive regulation of response to water deprivation; IMP:UniProtKB.
DR GO; GO:0050826; P:response to freezing; IDA:CACAO.
DR InterPro; IPR004238; LEA_4.
DR Pfam; PF02987; LEA_4; 3.
PE 2: Evidence at transcript level;
KW Coiled coil; Nucleus; Reference proteome; Stress response.
FT CHAIN 1..344
FT /note="Late embryogenesis abundant protein 17"
FT /id="PRO_0000271181"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 116..258
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 3..52
FT /evidence="ECO:0000255"
FT COMPBIAS 116..165
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 173..249
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 344 AA; 36791 MW; 21FF9404D4790330 CRC64;
MASRQDRREA RAEADARRAA EEIARARDER VMQAEVDARS AADEIARARA DRGAATMGAD
TAHHAAGGGG ILESVQEGAK SFVSAVGRTF GGARDTAAEK TSQTADATRD KLGEYKDYTA
DKARETNDSV ARKTNETADA SRDKLGEYKD YTADKTRETK DAVAQKASDA SEATKNKLGE
YKDALARKTR DAKDTTAQKA TEFKDGVKAT AQETRDATAD TARKAKDATK DTTQTAADKA
RETAATHDDA TDKGQGQGLL GALGNVTGAI KEKLTVSPAA TQEHLGGGEE RAVKERAAEK
AASVYFEEKD RLTRERAAER VDKCVEKCVE GCPDATCAHR HGKM
