LEA2R_ARATH
ID LEA2R_ARATH Reviewed; 166 AA.
AC O82355; Q8LC67;
DT 03-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1998, sequence version 1.
DT 25-MAY-2022, entry version 112.
DE RecName: Full=Desiccation-related protein At2g46140;
DE AltName: Full=LEA type-2 family protein At2g46140;
GN OrderedLocusNames=At2g46140; ORFNames=T3F17.21;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP STRUCTURE BY NMR OF 2-166.
RG Center for eukaryotic structural genomics (CESG);
RT "Solution structure of a putative late embryogenesis abundant (LEA) protein
RT At2g46140.";
RL Submitted (MAR-2005) to the PDB data bank.
CC -!- SIMILARITY: Belongs to the LEA type 2 family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC005397; AAC62908.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC10648.1; -; Genomic_DNA.
DR EMBL; BT005673; AAO64093.1; -; mRNA.
DR EMBL; BT004206; AAO42224.1; -; mRNA.
DR EMBL; AY086763; AAM63814.1; -; mRNA.
DR PIR; B84899; B84899.
DR RefSeq; NP_182137.1; NM_130176.3.
DR PDB; 1YYC; NMR; -; A=2-166.
DR PDBsum; 1YYC; -.
DR AlphaFoldDB; O82355; -.
DR BMRB; O82355; -.
DR SMR; O82355; -.
DR STRING; 3702.AT2G46140.1; -.
DR PaxDb; O82355; -.
DR PRIDE; O82355; -.
DR ProteomicsDB; 230208; -.
DR DNASU; 819221; -.
DR EnsemblPlants; AT2G46140.1; AT2G46140.1; AT2G46140.
DR GeneID; 819221; -.
DR Gramene; AT2G46140.1; AT2G46140.1; AT2G46140.
DR KEGG; ath:AT2G46140; -.
DR Araport; AT2G46140; -.
DR TAIR; locus:2062933; AT2G46140.
DR eggNOG; ENOG502RZ6Q; Eukaryota.
DR HOGENOM; CLU_118295_0_0_1; -.
DR InParanoid; O82355; -.
DR OMA; CLDWDID; -.
DR OrthoDB; 1306897at2759; -.
DR PhylomeDB; O82355; -.
DR EvolutionaryTrace; O82355; -.
DR PRO; PR:O82355; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; O82355; baseline and differential.
DR Genevisible; O82355; AT.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0005886; C:plasma membrane; HDA:TAIR.
DR GO; GO:0009269; P:response to desiccation; IEA:InterPro.
DR InterPro; IPR045043; Lea14-like.
DR InterPro; IPR004864; LEA_2.
DR InterPro; IPR013990; WHy-dom.
DR PANTHER; PTHR31459; PTHR31459; 1.
DR Pfam; PF03168; LEA_2; 1.
DR SMART; SM00769; WHy; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome.
FT CHAIN 1..166
FT /note="Desiccation-related protein At2g46140"
FT /id="PRO_0000250541"
FT CONFLICT 33
FT /note="N -> D (in Ref. 4; AAM63814)"
FT /evidence="ECO:0000305"
FT HELIX 4..29
FT /evidence="ECO:0007829|PDB:1YYC"
FT TURN 30..33
FT /evidence="ECO:0007829|PDB:1YYC"
FT STRAND 38..49
FT /evidence="ECO:0007829|PDB:1YYC"
FT STRAND 51..64
FT /evidence="ECO:0007829|PDB:1YYC"
FT STRAND 66..68
FT /evidence="ECO:0007829|PDB:1YYC"
FT STRAND 74..84
FT /evidence="ECO:0007829|PDB:1YYC"
FT STRAND 86..92
FT /evidence="ECO:0007829|PDB:1YYC"
FT STRAND 99..112
FT /evidence="ECO:0007829|PDB:1YYC"
FT HELIX 113..118
FT /evidence="ECO:0007829|PDB:1YYC"
FT STRAND 125..129
FT /evidence="ECO:0007829|PDB:1YYC"
FT STRAND 131..140
FT /evidence="ECO:0007829|PDB:1YYC"
FT STRAND 144..154
FT /evidence="ECO:0007829|PDB:1YYC"
FT STRAND 157..159
FT /evidence="ECO:0007829|PDB:1YYC"
SQ SEQUENCE 166 AA; 17846 MW; 5AD104365150B498 CRC64;
MASADEKVVE EKASVISSLL DKAKGFFAEK LANIPTPEAT VDDVDFKGVT RDGVDYHAKV
SVKNPYSQSI PICQISYILK SATRTIASGT IPDPGSLVGS GTTVLDVPVK VAYSIAVSLM
KDMCTDWDID YQLDIGLTFD IPVVGDITIP VSTQGEIKLP SLRDFF
