LEA3_ARATH
ID LEA3_ARATH Reviewed; 182 AA.
AC Q9SA57;
DT 13-APR-2016, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=Late embryogenesis abundant protein 3 {ECO:0000303|PubMed:18318901};
DE Short=LEA 3 {ECO:0000303|PubMed:18318901};
GN OrderedLocusNames=At1g03120 {ECO:0000312|Araport:AT1G03120};
GN ORFNames=F10O3.5 {ECO:0000312|EMBL:AAD25796.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000312|EMBL:AAD25796.1};
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=18318901; DOI=10.1186/1471-2164-9-118;
RA Hundertmark M., Hincha D.K.;
RT "LEA (late embryogenesis abundant) proteins and their encoding genes in
RT Arabidopsis thaliana.";
RL BMC Genomics 9:118-118(2008).
RN [4]
RP SUBCELLULAR LOCATION, GENE FAMILY, AND NOMENCLATURE.
RX PubMed=25005920; DOI=10.1105/tpc.114.127316;
RA Candat A., Paszkiewicz G., Neveu M., Gautier R., Logan D.C.,
RA Avelange-Macherel M.-H., Macherel D.;
RT "The ubiquitous distribution of late embryogenesis abundant proteins across
RT cell compartments in Arabidopsis offers tailored protection against abiotic
RT stress.";
RL Plant Cell 26:3148-3166(2014).
CC -!- FUNCTION: LEA proteins are late embryonic proteins abundant in higher
CC plant seed embryos. The function of those proteins is not known.
CC {ECO:0000305}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:25005920}. Nucleus
CC {ECO:0000269|PubMed:25005920}.
CC -!- SIMILARITY: Belongs to the LEA type SMP family. {ECO:0000305}.
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DR EMBL; AC006550; AAD25796.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE27533.1; -; Genomic_DNA.
DR PIR; C86162; C86162.
DR RefSeq; NP_171811.1; NM_100194.2.
DR AlphaFoldDB; Q9SA57; -.
DR STRING; 3702.AT1G03120.1; -.
DR PaxDb; Q9SA57; -.
DR PRIDE; Q9SA57; -.
DR ProteomicsDB; 230281; -.
DR EnsemblPlants; AT1G03120.1; AT1G03120.1; AT1G03120.
DR GeneID; 839571; -.
DR Gramene; AT1G03120.1; AT1G03120.1; AT1G03120.
DR KEGG; ath:AT1G03120; -.
DR Araport; AT1G03120; -.
DR TAIR; locus:2007529; AT1G03120.
DR eggNOG; ENOG502QPSX; Eukaryota.
DR HOGENOM; CLU_075678_1_0_1; -.
DR InParanoid; Q9SA57; -.
DR OMA; MNQRQAI; -.
DR OrthoDB; 1455194at2759; -.
DR PhylomeDB; Q9SA57; -.
DR PRO; PR:Q9SA57; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9SA57; baseline and differential.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0005730; C:nucleolus; IDA:TAIR.
DR GO; GO:0005634; C:nucleus; IDA:UniProtKB.
DR GO; GO:0006873; P:cellular ion homeostasis; IMP:TAIR.
DR GO; GO:0010226; P:response to lithium ion; IMP:TAIR.
DR GO; GO:0009845; P:seed germination; IMP:TAIR.
DR InterPro; IPR042971; LEA_SMP.
DR InterPro; IPR007011; LEA_SMP_dom.
DR PANTHER; PTHR31174; PTHR31174; 1.
DR Pfam; PF04927; SMP; 2.
PE 3: Inferred from homology;
KW Cytoplasm; Nucleus; Reference proteome; Repeat.
FT CHAIN 1..182
FT /note="Late embryogenesis abundant protein 3"
FT /id="PRO_0000436058"
FT DOMAIN 58..115
FT /note="SMP 1"
FT /evidence="ECO:0000255"
FT DOMAIN 123..181
FT /note="SMP 2"
FT /evidence="ECO:0000255"
FT REGION 1..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 145..182
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 7..11
FT /note="Nuclear localization signal (NLS)"
FT /evidence="ECO:0000250|UniProtKB:Q9LJ97"
SQ SEQUENCE 182 AA; 18942 MW; 33F1827C33CBE4E7 CRC64;
MAQHQHSPQR PRDQDNTRPH DQYGIVFSVS GDDVARKQGD SFSQPDPTVA TMGSVDTVTI
GEALEATALS LGDKPVDRRD AAAIQAAETR ATGESKGRPG GLAVAAQAAA TTNEQTVSEE
DKVNIADILT DAAERLPGDK VVTSEDAEAV VGAELRSSSE MKTTPGGVAD SMSAGARLNQ
QL
